scripting_documentation/RosettaScripts/xsd/mover_ConnectChainsMover

Autogenerated Tag Syntax Documentation:

only allow loops from the most frequent abegos

<ConnectChainsMover name="(&string;)" loopLengthRange="(1,4 &size_cs_pair;)"
        RMSthreshold="(0.4 &real;)"
        resAdjustmentRangeSide1="(-3,3 &int_cslist;)"
        resAdjustmentRangeSide2="(-3,3 &int_cslist;)"
        resAdjustmentRangeSide1_sheet="(-1,1 &int_cslist;)"
        resAdjustmentRangeSide2_sheet="(-1,1 &int_cslist;)"
        allowed_loop_abegos="(&string;)" label_loop="(&string;)"
        chain_connections="(&string;)" reletter_chains="(false &bool;)"
        fragment_store="(&string;)" fragment_store_format="(hashed &string;)"
        numb_stubs_to_consider="(1 &non_negative_integer;)"
        fragment_store_compression="(all &string;)" />

loopLengthRange: Loops can range from 1 to 5 residue
RMSthreshold: loop must be within 0.4 angsrom to a pdb in the VALL
resAdjustmentRangeSide1: residue adjustment applied before the loop
resAdjustmentRangeSide2: residue adjustment applied after the loop
resAdjustmentRangeSide1_sheet: residue adjustment applied before the loop if sheet
resAdjustmentRangeSide2_sheet: residue adjustment applied after the loop if sheet
allowed_loop_abegos: comma seperated string of allowed abegos, default=empty all abegos
label_loop: label loop in pdb_info object
chain_connections: (REQUIRED) what chains to connect
reletter_chains: what chains to connect
fragment_store: path to fragment store. Note:All fragment stores use the same database
fragment_store_format: Options:hashed,unhashed new format is unhashed
numb_stubs_to_consider: number of stubs to consider. Fewer-faster, higher-increased accuracy
fragment_store_compression: Options:helix_shortLoop,sheet_shortLoop,all

scripting_documentation/RosettaScripts/xsd/mover_ConnectChainsMover_type