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The make_fragments.pl script for Rosetta3.3 now refers to a runPorter.pl script that uses Porter (http://distill.ucd.ie/porter/) to generate a PsiPred style output. I’ve been able to get the Porter executables, but where is the runPorter.pl script?
I’ve sent an email to someone who might know but haven’t heard back yet – if they don’t contact you within a few days let me know.
Hi Everyone, I have the same problem, missing the runPorter.pl and the Porter executables. Can anyone please share these files? Thanks a lot.
Lei