Did anyone do ensemble docking using rosetta3.4?
I don’t know how to prepare those seemed like energy score(lowres_reference_energies_ , and highres_reference_energies_ from source code) at
the end of pdblist file?
An example of the pdblist is below:
input/xxip01_0001.pdb.ppk
input/xxip02_0001.pdb.ppk
input/xxip03_0001.pdb.ppk
input/xxip04_0001.pdb.ppk
input/xxip05_0001.pdb.ppk
input/xxip06_0001.pdb.ppk
input/xxip07_0001.pdb.ppk
input/xxip08_0001.pdb.ppk
input/xxip09_0001.pdb.ppk
input/xxip10_0001.pdb.ppk
3.91556
1.21555
3.651
5.58172
5.10037
0
5.55114
2.70723
1.01661
2.68865
-53.1856
-54.0107
-50.6703
-51.266
-55.8924
-55.34
-53.3811
-53.7216
-49.4558
-52.6443
.
