Member Site › Forums › Rosetta 3 › Rosetta 3 – General › RosettaCM rename or swap the order of sequences in your alignment file
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December 22, 2017 at 4:42 pm #2822
Anonymous
I want to do homology modelling with the below structures. First, I’m trying to create a threaded model according to the tutorial here https://www.rosettacommons.org/docs/latest/application_documentation/structure_prediction/RosettaCM. I’m recieving the below error and I would appreciate if someone helps me debug it. I also want to note that my structures have two chains, which is unlike the other multiple template tutorial here https://www.rosettacommons.org/demos/latest/tutorials/rosetta_cm/rosetta_cm_tutorial.
The error:
[labusr@luxor scripts]$ /usr/bin/python /home/labusr/rosetta/tools/protein_tools/scripts/setup_RosettaCM.py --fasta /home/labusr/Ahmad/Rosetta/CM/5ucy.fasta --alignment /home/labusr/Ahmad/Rosetta/CM/alignment.clustal --alignment_format clustalw --templates /home/labusr/Ahmad/Rosetta/CM/1JFF.pdb --rosetta_bin $ROSETTA3/source/bin/ --verbose
Using rosetta from /home/labusr/rosetta/main//source/bin/
Switching to directory: /tmp/tmptpxMnK
Traceback (most recent call last):
File "/home/labusr/rosetta/tools/protein_tools/scripts/setup_RosettaCM.py", line 609, in <module>
-> You may have to rename or swap the order of sequences in your alignment file."
AssertionError: The first sequence ID in a clustalw alignment file must match the fasta file name.
-> You may have to rename or swap the order of sequences in your alignment file.
[labusr@luxor scripts]$The alignment file:
CLUSTAL O(1.2.4) multiple sequence alignment
5UCY:B|PDBID|CHAIN|SEQUENCE MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQ--LERINVYYNEATGGR
1JFF:B|PDBID|CHAIN|SEQUENCE MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQ--LERINVYYNEAAGNK
5UCY:A|PDBID|CHAIN|SEQUENCE MREVISIHVGQGGIQVGNACWELFCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGK
1JFF:A|PDBID|CHAIN|SEQUENCE MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
*** : *: ** * *:* **: . ****:* * .*. : : :*.::.*: ..:
5UCY:B|PDBID|CHAIN|SEQUENCE YVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLD
1JFF:B|PDBID|CHAIN|SEQUENCE YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD
5UCY:A|PDBID|CHAIN|SEQUENCE HVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
1JFF:A|PDBID|CHAIN|SEQUENCE HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
:****:::**** .:*.**:* : *:*:*:::: *: .*.**:*:**** * *::* **
5UCY:B|PDBID|CHAIN|SEQUENCE VVRKEAEGCDCLQGFQITHSLGGGTGSGMGTLLISKVREEYPDRIMETFSVVPSPKVSDT
1JFF:B|PDBID|CHAIN|SEQUENCE VVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDT
5UCY:A|PDBID|CHAIN|SEQUENCE RIRKLADNCTGLQGFLVFNSVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA
1JFF:A|PDBID|CHAIN|SEQUENCE RIRKLADQCTGLQGFSVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
:** :: * **** : :*.*******: :**:.:: :* .: *:: *:*:** :
5UCY:B|PDBID|CHAIN|SEQUENCE VVEPYNATLSVHQLVENADECMVIDNEALYDICFRTLKLTTPTYGDLNHLVSAAMSGVTC
1JFF:B|PDBID|CHAIN|SEQUENCE VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT
5UCY:A|PDBID|CHAIN|SEQUENCE VVEPYNSILSTHSLLEHTDVAVMLDNEAIYDICRRNLDIERPTYTNLNRLIAQVISSLTA
1JFF:A|PDBID|CHAIN|SEQUENCE VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
******: *:.* :*::* :****:**** *.*.: *** :**:*:. :*.:*
5UCY:B|PDBID|CHAIN|SEQUENCE CLRFPGQLNSDLRKLAVNLIPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQMFDAKN
1JFF:B|PDBID|CHAIN|SEQUENCE CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKN
5UCY:A|PDBID|CHAIN|SEQUENCE SLRFDGALNVDITEFQTNLVPYPRIHFMLSSYAPIISAEKAYHEQLSVAEITNSAFEPAN
1JFF:A|PDBID|CHAIN|SEQUENCE SLRFDGALNVDLTEFQTNLVPYPRGHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
.*** * ** *: :: .*::*:** ** : :**: * . :. *:* *:*: *: *
5UCY:B|PDBID|CHAIN|SEQUENCE MMCAADPRHGRYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSSICDIPP
1JFF:B|PDBID|CHAIN|SEQUENCE MMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPP
5UCY:A|PDBID|CHAIN|SEQUENCE MMAKCDPRHGKYMACSMMYRGDVVPKDVNASIATIKTKRTIQFVDWCPTGFKVGINYQPP
1JFF:A|PDBID|CHAIN|SEQUENCE QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYEPP
* .*****:*:: . ::** : *:*: : .::.*.: **:* *...* .: **
5UCY:B|PDBID|CHAIN|SEQUENCE KG
LKMAVTFVGNSTAIQEMFKRVAEQFTAMFRRKAFLHWYTGEGMDEMEFTE
1JFF:B|PDBID|CHAIN|SEQUENCE RG
LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTE
5UCY:A|PDBID|CHAIN|SEQUENCE TVVPGGDLAKVMRAVCMISNSTAIAEVFSRLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
1JFF:A|PDBID|CHAIN|SEQUENCE TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
: :. ::.*:*** * : *: .:* *: ::**:***.****:* **:*
5UCY:B|PDBID|CHAIN|SEQUENCE AESNMNDLVSEYQQYQDAT
1JFF:B|PDBID|CHAIN|SEQUENCE AESNMNDLVSEYQQYQDATADEQGEFEEEGEEDEA
5UCY:A|PDBID|CHAIN|SEQUENCE AREDLAALEKDYEEVGIETAE
1JFF:A|PDBID|CHAIN|SEQUENCE AREDMAALEKDYEEVGVDSVEGEGE--EEGEEY--Thanks a ton.
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December 22, 2017 at 9:00 pm #13969
Attempting to debug this error, I tried to test the scripts in the tutorial with an example. Target: 1u19.fasta, template: 2rh1.pdb. I made the alignment into the grishin format manbually because setup_RosettaCM.py couldn’t do it automatically. The alignment is:
## 1u19 2rh1.pdb
#
scores from program: 0
0
PWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRF-GENHAIMGVAFTWVMA-LACAAPPLVGWSRYIP-EGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESA----T
TQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCG
0 DYKDDDAMGQPGNGSAFLLAPNRSHAPDHDVTQQRDEVWVVGMGIVMSLIVLAIVF-GNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILMKMWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATHQEAINCYAEET---CCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYKFCLKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIRKEVY-ILLNWIGYVNSGFNPLIYCRS-PDFRIAFQELLCLRRSSLKAYGNGYSSNGNTGEQSGI entered the following for the threading, and it seemed to have run fine:
/usr/bin/python /home/labusr/rosetta/tools/protein_tools/scripts/setup_RosettaCM.py --fasta /home/labusr/Ahmad/Rosetta/CM/Test/1u19.fasta --alignment /home/labusr/Ahmad/Rosetta/CM/Test/alignment.grishin --alignment_format grishin --templates /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb --rosetta_bin $ROSETTA3/source/bin/ --verboseFor the hybridization, I used the XML provided in the tutorial, which gave an error. I had to convert it to the new XML format using rewrite_rosetta_script.py, this is the error I recieved:
[labusr@luxor scripts]$ $ROSETTA3/source/bin/rosetta_scripts.linuxgccrelease -in:file:fasta /home/labusr/Ahmad/Rosetta/CM/Test/1u19.fasta -parser:protocol /home/labusr/Ahmad/Rosetta/CM/Test/hybridize_new.xml -default_max_cycles 200 -dualspace -restore_talaris_behavior
core.init: Rosetta version rosetta.source.release-152:d6547f6858282e67c41356255dfdd63b0e7a75aa 2017-09-08 02:01:37.594540 from http://www.rosettacommons.org
core.init: command: /home/labusr/rosetta/main//source/bin/rosetta_scripts.linuxgccrelease -in:file:fasta /home/labusr/Ahmad/Rosetta/CM/Test/1u19.fasta -parser:protocol /home/labusr/Ahmad/Rosetta/CM/Test/hybridize_new.xml -default_max_cycles 200 -dualspace -restore_talaris_behavior
core.init: 'RNG device' seed mode, using '/dev/urandom', seed=-1227942856 seed_offset=0 real_seed=-1227942856
core.init.random: RandomGenerator:init: Normal mode, seed=-1227942856 RG_type=mt19937
core.init: Resolved executable path: /home/labusr/rosetta/main/source/build/src/release/linux/3.10/64/x86/gcc/4.8/default/rosetta_scripts.default.linuxgccrelease
core.init: Looking for database based on location of executable: /home/labusr/rosetta/main/database/
protocols.evaluation.ChiWellRmsdEvaluatorCreator: Evaluation Creator active ...
core.chemical.GlobalResidueTypeSet: Finished initializing centroid residue type set. Created 62 residue types
core.chemical.GlobalResidueTypeSet: Total time to initialize 0.02 seconds.
protocols.rosetta_scripts.RosettaScriptsParser: dock_design_filename=/home/labusr/Ahmad/Rosetta/CM/Test/hybridize_new.xml
protocols.rosetta_scripts.RosettaScriptsParser: Generating XML Schema for rosetta_scripts...
protocols.rosetta_scripts.RosettaScriptsParser: ...done
protocols.rosetta_scripts.RosettaScriptsParser: Initializing schema validator...
protocols.rosetta_scripts.RosettaScriptsParser: ...done
protocols.rosetta_scripts.RosettaScriptsParser: Validating input script...
protocols.rosetta_scripts.RosettaScriptsParser: ...done
protocols.rosetta_scripts.RosettaScriptsParser: Parsed script:
<ROSETTASCRIPTS>
<SCOREFXNS>
<ScoreFunction name="stage1" symmetric="0" weights="score3">
<Reweight scoretype="atom_pair_constraint" weight="0.5"/>
</ScoreFunction>
<ScoreFunction name="stage2" symmetric="0" weights="score4_smooth_cart">
<Reweight scoretype="atom_pair_constraint" weight="0.5"/>
</ScoreFunction>
<ScoreFunction name="fullatom" symmetric="0" weights="talaris2013_cart">
<Reweight scoretype="atom_pair_constraint" weight="0.5"/>
</ScoreFunction>
</SCOREFXNS>
<MOVERS>
<Hybridize batch="1" fa_scorefxn="fullatom" name="hybridize" stage1_increase_cycles="1.0" stage1_scorefxn="stage1" stage2_increase_cycles="1.0" stage2_scorefxn="stage2">
<Template cst_file="AUTO" pdb="/home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb" weight="1.000"/>
</Hybridize>
<FastRelax name="relax" scorefxn="talaris2013"/>
</MOVERS>
<PROTOCOLS>
<Add mover="hybridize"/>
<Add mover="relax"/>
</PROTOCOLS>
<OUTPUT scorefxn="talaris2013"/>
</ROSETTASCRIPTS>
core.scoring.ScoreFunctionFactory: SCOREFUNCTION: talaris2014.wts
core.scoring.etable: Starting energy table calculation
core.scoring.etable: smooth_etable: changing atr/rep split to bottom of energy well
core.scoring.etable: smooth_etable: spline smoothing lj etables (maxdis = 6)
core.scoring.etable: smooth_etable: spline smoothing solvation etables (max_dis = 6)
core.scoring.etable: Finished calculating energy tables.
basic.io.database: Database file opened: scoring/score_functions/hbonds/sp2_elec_params/HBPoly1D.csv
basic.io.database: Database file opened: scoring/score_functions/hbonds/sp2_elec_params/HBFadeIntervals.csv
basic.io.database: Database file opened: scoring/score_functions/hbonds/sp2_elec_params/HBEval.csv
basic.io.database: Database file opened: scoring/score_functions/rama/Rama_smooth_dyn.dat_ss_6.4
basic.io.database: Database file opened: scoring/score_functions/P_AA_pp/P_AA
basic.io.database: Database file opened: scoring/score_functions/P_AA_pp/P_AA_n
basic.io.database: Database file opened: scoring/score_functions/P_AA_pp/P_AA_pp
core.scoring.etable: Using alternate parameters: LJ_RADIUS_SOFT in Etable construction.
core.scoring.etable: Starting energy table calculation
core.scoring.etable: smooth_etable: changing atr/rep split to bottom of energy well
core.scoring.etable: smooth_etable: spline smoothing lj etables (maxdis = 6)
core.scoring.etable: smooth_etable: spline smoothing solvation etables (max_dis = 6)
core.scoring.etable: Finished calculating energy tables.
basic.io.database: Database file opened: scoring/score_functions/PairEPotential/pdb_pair_stats_fine
basic.io.database: Database file opened: scoring/score_functions/InterchainPotential/interchain_env_log.txt
basic.io.database: Database file opened: scoring/score_functions/InterchainPotential/interchain_pair_log.txt
basic.io.database: Database file opened: scoring/score_functions/EnvPairPotential/env_log.txt
basic.io.database: Database file opened: scoring/score_functions/EnvPairPotential/cbeta_den.txt
basic.io.database: Database file opened: scoring/score_functions/EnvPairPotential/pair_log.txt
basic.io.database: Database file opened: scoring/score_functions/EnvPairPotential/cenpack_log.txt
basic.io.database: Database file opened: scoring/score_functions/SecondaryStructurePotential/phi.theta.36.HS.resmooth
basic.io.database: Database file opened: scoring/score_functions/SecondaryStructurePotential/phi.theta.36.SS.resmooth
protocols.jd2.parser.ScoreFunctionLoader: defined score function "stage1" with weights "score3"
protocols.jd2.parser.ScoreFunctionLoader: setting stage1 weight atom_pair_constraint to 0.5
basic.io.database: Database file opened: scoring/score_functions/centroid_smooth/cen_smooth_params.txt
core.scoring.CartesianBondedEnergy: Initializing IdealParametersDatabase with default Ks=300 , 80 , 20 , 10 , 40
basic.io.database: Database file opened: scoring/score_functions/bondlength_bondangle_talaris//default-lengths.txt
core.scoring.CartesianBondedEnergy: Read 757 bb-independent lengths.
basic.io.database: Database file opened: scoring/score_functions/bondlength_bondangle_talaris//default-angles.txt
core.scoring.CartesianBondedEnergy: Read 1434 bb-independent angles.
basic.io.database: Database file opened: scoring/score_functions/bondlength_bondangle_talaris//default-torsions.txt
core.scoring.CartesianBondedEnergy: Read 1 bb-independent torsions.
basic.io.database: Database file opened: scoring/score_functions/bondlength_bondangle_talaris//default-improper.txt
core.scoring.CartesianBondedEnergy: Read 2251 bb-independent improper tors.
protocols.jd2.parser.ScoreFunctionLoader: defined score function "stage2" with weights "score4_smooth_cart"
protocols.jd2.parser.ScoreFunctionLoader: setting stage2 weight atom_pair_constraint to 0.5
protocols.jd2.parser.ScoreFunctionLoader: defined score function "fullatom" with weights "talaris2013_cart"
protocols.jd2.parser.ScoreFunctionLoader: setting fullatom weight atom_pair_constraint to 0.5
core.scoring.ScoreFunctionFactory: SCOREFUNCTION: talaris2014.wts
core.import_pose.import_pose: File '/home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb' automatically determined to be of type PDB
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 2 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: GLU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 3 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 9 atoms at position 4 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: TRP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 5 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 6 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 8 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: MET
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 10 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 11 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 12 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: MET
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 13 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 14 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 15 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 16 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 17 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 19 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 20 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 21 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: PHE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 23 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: ASN
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 24 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 25 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 26 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 27 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 28 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 30 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 32 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: LYS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 33 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: PHE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 34 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: GLU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 35 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: ARG
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 36 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 37 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: GLN
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 38 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 39 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 40 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 41 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: ASN
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 7 atoms at position 42 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: TYR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 43 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: PHE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 44 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 45 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 46 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 47 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 49 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: CYS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 51 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: ASP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 52 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 53 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 54 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: MET
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 56 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 58 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 59 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 60 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: PRO
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 61 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: PHE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 5 atoms at position 65 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: HIS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 66 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 67 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 68 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: MET
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 69 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: LYS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 70 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: MET
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 9 atoms at position 71 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: TRP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 72 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 73 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: PHE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 75 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: ASN
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 76 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: PHE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 9 atoms at position 77 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: TRP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 78 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: CYS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 79 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: GLU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 80 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: PHE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 9 atoms at position 81 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: TRP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 82 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 83 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 84 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 85 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: ASP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 86 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 87 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 88 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: CYS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 89 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 90 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 92 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 93 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 94 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: GLU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 95 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 96 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 97 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: CYS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 98 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 99 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 101 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 102 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: ASP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 103 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: ARG
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 7 atoms at position 104 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: TYR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 105 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: PHE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 107 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 108 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 109 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 110 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: PRO
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 111 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: PHE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 112 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: LYS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 7 atoms at position 113 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: TYR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 114 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: GLN
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 115 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 116 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 117 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 118 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 119 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: LYS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 120 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: ASN
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 121 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: LYS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 123 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: ARG
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 124 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 125 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 126 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 127 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 128 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: MET
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 129 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 9 atoms at position 130 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: TRP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 131 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 132 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 133 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 135 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 136 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 137 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 138 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: PHE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 139 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 140 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: PRO
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 141 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 142 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: GLN
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 143 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: MET
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 5 atoms at position 144 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: HIS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 9 atoms at position 145 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: TRP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 7 atoms at position 146 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: TYR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 147 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: ARG
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 149 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 5 atoms at position 150 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: HIS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 151 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: GLN
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 152 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: GLU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 154 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 155 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: ASN
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 156 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: CYS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 7 atoms at position 157 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: TYR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 159 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: GLU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 160 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: GLU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 161 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 162 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: CYS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 163 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: CYS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 164 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: ASP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 165 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: PHE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 166 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: PHE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 167 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 168 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: ASN
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 169 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: GLN
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 7 atoms at position 171 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: TYR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 173 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 175 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 176 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 177 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 178 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 179 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 180 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: PHE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 7 atoms at position 181 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: TYR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 182 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 183 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: PRO
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 184 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 185 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 186 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 187 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: MET
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 188 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 189 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: PHE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 190 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 7 atoms at position 191 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: TYR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 192 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 193 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: ARG
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 194 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 195 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: PHE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 196 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: GLN
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 197 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: GLU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 199 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: LYS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 200 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: ARG
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 201 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: GLN
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 202 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 203 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: LYS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 204 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: PHE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 205 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: CYS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 206 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 207 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: LYS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 208 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: GLU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 5 atoms at position 209 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: HIS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 210 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: LYS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 212 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 213 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: LYS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 214 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 215 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 217 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 218 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 219 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: MET
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 221 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 222 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: PHE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 223 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 224 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 225 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: CYS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 9 atoms at position 226 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: TRP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 227 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 228 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: PRO
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 229 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: PHE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 230 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: PHE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 231 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 232 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 233 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: ASN
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 234 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 235 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 5 atoms at position 236 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: HIS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 237 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 238 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 239 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: GLN
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 240 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: ASP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 241 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: ASN
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 242 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 243 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 244 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: ARG
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 245 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: LYS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 246 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: GLU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 247 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 7 atoms at position 248 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: TYR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 249 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 250 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 251 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 252 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: ASN
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 9 atoms at position 253 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: TRP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 254 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 7 atoms at position 256 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: TYR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 257 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 258 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: ASN
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 259 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 261 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: PHE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 262 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: ASN
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 263 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: PRO
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 264 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 265 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 7 atoms at position 266 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: TYR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 267 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: CYS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 268 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: ARG
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 269 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 270 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: PRO
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 271 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: ASP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 272 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: PHE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 273 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: ARG
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 274 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 276 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: PHE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 277 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: GLN
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 278 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: GLU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 279 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 280 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 281 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: CYS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 282 in file /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb. Best match rsd_type: LEU:CtermProteinFull
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ASP:NtermProteinFull 1
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue GLU 2
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue VAL 3
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue TRP 4
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue VAL 5
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue VAL 6
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue GLY 7
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue MET 8
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue GLY 9
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ILE 10
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue VAL 11
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue MET 12
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue SER 13
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue LEU 14
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ILE 15
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue VAL 16
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue LEU 17
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ALA 18
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ILE 19
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue VAL 20
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue PHE 21
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue GLY 22
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ASN 23
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue VAL 24
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue LEU 25
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue VAL 26
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ILE 27
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue THR 28
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ALA 29
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ILE 30
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ALA 31
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue LYS 32
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue PHE 33
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue GLU 34
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ARG 35
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue LEU 36
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue GLN 37
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue THR 38
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue VAL 39
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue THR 40
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ASN 41
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue TYR 42
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue PHE 43
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ILE 44
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue THR 45
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue SER 46
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue LEU 47
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ALA 48
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue CYS 49
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ALA 50
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ASP 51
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue LEU 52
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue VAL 53
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue MET 54
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue GLY 55
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue LEU 56
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ALA 57
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue VAL 58
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue VAL 59
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue PRO 60
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue PHE 61
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue GLY 62
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ALA 63
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ALA 64
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue HIS 65
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ILE 66
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue LEU 67
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue MET 68
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue LYS 69
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue MET 70
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue TRP 71
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue THR 72
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue PHE 73
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue GLY 74
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ASN 75
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue PHE 76
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue TRP 77
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue CYS 78
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue GLU 79
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue PHE 80
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue TRP 81
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue THR 82
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue SER 83
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ILE 84
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ASP 85
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue VAL 86
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue LEU 87
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue CYS 88
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue VAL 89
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue THR 90
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ALA 91
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue SER 92
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ILE 93
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue GLU 94
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue THR 95
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue LEU 96
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue CYS 97
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue VAL 98
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ILE 99
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ALA 100
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue VAL 101
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ASP 102
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ARG 103
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue TYR 104
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue PHE 105
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ALA 106
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ILE 107
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue THR 108
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue SER 109
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue PRO 110
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue PHE 111
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue LYS 112
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue TYR 113
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue GLN 114
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue SER 115
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue LEU 116
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue LEU 117
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue THR 118
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue LYS 119
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ASN 120
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue LYS 121
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ALA 122
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ARG 123
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue VAL 124
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ILE 125
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ILE 126
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue LEU 127
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue MET 128
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue VAL 129
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue TRP 130
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ILE 131
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue VAL 132
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue SER 133
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue GLY 134
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue LEU 135
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue THR 136
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue SER 137
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue PHE 138
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue LEU 139
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue PRO 140
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ILE 141
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue GLN 142
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue MET 143
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue HIS 144
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue TRP 145
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue TYR 146
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ARG 147
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ALA 148
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue THR 149
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue HIS 150
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue GLN 151
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue GLU 152
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ALA 153
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ILE 154
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ASN 155
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue CYS 156
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue TYR 157
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ALA 158
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue GLU 159
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue GLU 160
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue THR 161
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue CYS 162
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue CYS 163
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ASP 164
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue PHE 165
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue PHE 166
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue THR 167
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ASN 168
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue GLN 169
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ALA 170
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue TYR 171
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ALA 172
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ILE 173
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ALA 174
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue SER 175
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue SER 176
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ILE 177
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue VAL 178
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue SER 179
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue PHE 180
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue TYR 181
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue VAL 182
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue PRO 183
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue LEU 184
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue VAL 185
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ILE 186
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue MET 187
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue VAL 188
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue PHE 189
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue VAL 190
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue TYR 191
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue SER 192
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ARG 193
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue VAL 194
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue PHE 195
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue GLN 196
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue GLU 197
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ALA 198
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue LYS 199
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ARG 200
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue GLN 201
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue LEU 202
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue LYS 203
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue PHE 204
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue CYS 205
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue LEU 206
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue LYS 207
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue GLU 208
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue HIS 209
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue LYS 210
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ALA 211
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue LEU 212
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue LYS 213
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue THR 214
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue LEU 215
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue GLY 216
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ILE 217
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ILE 218
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue MET 219
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue GLY 220
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue THR 221
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue PHE 222
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue THR 223
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue LEU 224
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue CYS 225
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue TRP 226
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue LEU 227
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue PRO 228
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue PHE 229
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue PHE 230
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ILE 231
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue VAL 232
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ASN 233
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ILE 234
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue VAL 235
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue HIS 236
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue VAL 237
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ILE 238
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue GLN 239
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ASP 240
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ASN 241
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue LEU 242
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ILE 243
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ARG 244
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue LYS 245
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue GLU 246
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue VAL 247
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue TYR 248
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ILE 249
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue LEU 250
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue LEU 251
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ASN 252
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue TRP 253
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ILE 254
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue GLY 255
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue TYR 256
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue VAL 257
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ASN 258
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue SER 259
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue GLY 260
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue PHE 261
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ASN 262
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue PRO 263
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue LEU 264
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ILE 265
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue TYR 266
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue CYS 267
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ARG 268
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue SER 269
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue PRO 270
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ASP 271
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue PHE 272
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ARG 273
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ILE 274
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue ALA 275
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue PHE 276
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue GLN 277
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue GLU 278
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue LEU 279
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue LEU 280
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue CYS 281
core.conformation.Conformation: [ WARNING ] missing heavyatom: CEN on residue LEU:CtermProteinFull 282
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 2 atom CD (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 2 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 2 atom OE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 2 atom OE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 3 atom CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 3 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 4 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 4 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 4 atom CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 4 atom CE3 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 4 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 4 atom CH2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 4 atom CZ2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 4 atom CZ3 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 4 atom NE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 5 atom CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 5 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 6 atom CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 6 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 8 atom CE (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 8 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 8 atom SD (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 10 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 10 atom CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 10 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 11 atom CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 11 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 12 atom CE (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 12 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 12 atom SD (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 13 atom OG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 14 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 14 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 14 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 15 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 15 atom CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 15 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 16 atom CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 16 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 17 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 17 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 17 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 19 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 19 atom CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 19 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 20 atom CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 20 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 21 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 21 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 21 atom CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 21 atom CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 21 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 21 atom CZ (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 23 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 23 atom ND2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 23 atom OD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 24 atom CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 24 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 25 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 25 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 25 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 26 atom CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 26 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 27 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 27 atom CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 27 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 28 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 28 atom OG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 30 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 30 atom CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 30 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 32 atom CD (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 32 atom CE (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 32 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 32 atom NZ (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 33 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 33 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 33 atom CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 33 atom CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 33 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 33 atom CZ (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 34 atom CD (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 34 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 34 atom OE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 34 atom OE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 35 atom CD (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 35 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 35 atom CZ (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 35 atom NE (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 35 atom NH1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 35 atom NH2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 36 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 36 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 36 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 37 atom CD (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 37 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 37 atom NE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 37 atom OE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 38 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 38 atom OG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 39 atom CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 39 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 40 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 40 atom OG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 41 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 41 atom ND2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 41 atom OD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 42 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 42 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 42 atom CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 42 atom CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 42 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 42 atom CZ (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 42 atom OH (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 43 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 43 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 43 atom CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 43 atom CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 43 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 43 atom CZ (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 44 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 44 atom CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 44 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 45 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 45 atom OG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 46 atom OG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 47 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 47 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 47 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 49 atom SG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 51 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 51 atom OD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 51 atom OD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 52 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 52 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 52 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 53 atom CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 53 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 54 atom CE (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 54 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 54 atom SD (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 56 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 56 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 56 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 58 atom CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 58 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 59 atom CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 59 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 60 atom CD (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 60 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 61 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 61 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 61 atom CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 61 atom CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 61 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 61 atom CZ (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 65 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 65 atom CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 65 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 65 atom ND1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 65 atom NE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 66 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 66 atom CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 66 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 67 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 67 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 67 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 68 atom CE (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 68 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 68 atom SD (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 69 atom CD (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 69 atom CE (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 69 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 69 atom NZ (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 70 atom CE (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 70 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 70 atom SD (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 71 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 71 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 71 atom CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 71 atom CE3 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 71 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 71 atom CH2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 71 atom CZ2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 71 atom CZ3 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 71 atom NE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 72 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 72 atom OG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 73 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 73 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 73 atom CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 73 atom CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 73 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 73 atom CZ (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 75 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 75 atom ND2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 75 atom OD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 76 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 76 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 76 atom CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 76 atom CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 76 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 76 atom CZ (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 77 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 77 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 77 atom CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 77 atom CE3 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 77 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 77 atom CH2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 77 atom CZ2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 77 atom CZ3 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 77 atom NE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 78 atom SG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 79 atom CD (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 79 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 79 atom OE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 79 atom OE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 80 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 80 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 80 atom CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 80 atom CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 80 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 80 atom CZ (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 81 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 81 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 81 atom CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 81 atom CE3 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 81 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 81 atom CH2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 81 atom CZ2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 81 atom CZ3 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 81 atom NE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 82 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 82 atom OG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 83 atom OG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 84 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 84 atom CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 84 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 85 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 85 atom OD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 85 atom OD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 86 atom CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 86 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 87 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 87 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 87 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 88 atom SG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 89 atom CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 89 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 90 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 90 atom OG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 92 atom OG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 93 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 93 atom CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 93 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 94 atom CD (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 94 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 94 atom OE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 94 atom OE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 95 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 95 atom OG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 96 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 96 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 96 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 97 atom SG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 98 atom CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 98 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 99 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 99 atom CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 99 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 101 atom CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 101 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 102 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 102 atom OD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 102 atom OD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 103 atom CD (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 103 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 103 atom CZ (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 103 atom NE (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 103 atom NH1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 103 atom NH2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 104 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 104 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 104 atom CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 104 atom CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 104 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 104 atom CZ (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 104 atom OH (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 105 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 105 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 105 atom CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 105 atom CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 105 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 105 atom CZ (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 107 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 107 atom CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 107 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 108 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 108 atom OG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 109 atom OG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 110 atom CD (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 110 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 111 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 111 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 111 atom CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 111 atom CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 111 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 111 atom CZ (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 112 atom CD (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 112 atom CE (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 112 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 112 atom NZ (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 113 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 113 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 113 atom CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 113 atom CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 113 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 113 atom CZ (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 113 atom OH (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 114 atom CD (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 114 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 114 atom NE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 114 atom OE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 115 atom OG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 116 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 116 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 116 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 117 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 117 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 117 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 118 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 118 atom OG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 119 atom CD (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 119 atom CE (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 119 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 119 atom NZ (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 120 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 120 atom ND2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 120 atom OD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 121 atom CD (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 121 atom CE (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 121 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 121 atom NZ (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 123 atom CD (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 123 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 123 atom CZ (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 123 atom NE (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 123 atom NH1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 123 atom NH2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 124 atom CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 124 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 125 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 125 atom CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 125 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 126 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 126 atom CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 126 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 127 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 127 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 127 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 128 atom CE (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 128 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 128 atom SD (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 129 atom CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 129 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 130 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 130 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 130 atom CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 130 atom CE3 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 130 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 130 atom CH2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 130 atom CZ2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 130 atom CZ3 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 130 atom NE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 131 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 131 atom CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 131 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 132 atom CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 132 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 133 atom OG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 135 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 135 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 135 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 136 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 136 atom OG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 137 atom OG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 138 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 138 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 138 atom CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 138 atom CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 138 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 138 atom CZ (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 139 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 139 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 139 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 140 atom CD (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 140 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 141 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 141 atom CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 141 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 142 atom CD (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 142 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 142 atom NE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 142 atom OE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 143 atom CE (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 143 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 143 atom SD (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 144 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 144 atom CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 144 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 144 atom ND1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 144 atom NE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 145 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 145 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 145 atom CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 145 atom CE3 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 145 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 145 atom CH2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 145 atom CZ2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 145 atom CZ3 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 145 atom NE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 146 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 146 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 146 atom CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 146 atom CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 146 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 146 atom CZ (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 146 atom OH (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 147 atom CD (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 147 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 147 atom CZ (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 147 atom NE (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 147 atom NH1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 147 atom NH2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 149 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 149 atom OG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 150 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 150 atom CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 150 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 150 atom ND1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 150 atom NE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 151 atom CD (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 151 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 151 atom NE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 151 atom OE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 152 atom CD (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 152 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 152 atom OE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 152 atom OE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 154 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 154 atom CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 154 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 155 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 155 atom ND2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 155 atom OD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 156 atom SG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 157 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 157 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 157 atom CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 157 atom CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 157 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 157 atom CZ (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 157 atom OH (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 159 atom CD (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 159 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 159 atom OE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 159 atom OE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 160 atom CD (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 160 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 160 atom OE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 160 atom OE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 161 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 161 atom OG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 162 atom SG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 163 atom SG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 164 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 164 atom OD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 164 atom OD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 165 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 165 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 165 atom CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 165 atom CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 165 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 165 atom CZ (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 166 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 166 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 166 atom CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 166 atom CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 166 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 166 atom CZ (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 167 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 167 atom OG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 168 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 168 atom ND2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 168 atom OD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 169 atom CD (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 169 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 169 atom NE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 169 atom OE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 171 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 171 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 171 atom CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 171 atom CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 171 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 171 atom CZ (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 171 atom OH (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 173 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 173 atom CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 173 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 175 atom OG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 176 atom OG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 177 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 177 atom CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 177 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 178 atom CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 178 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 179 atom OG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 180 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 180 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 180 atom CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 180 atom CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 180 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 180 atom CZ (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 181 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 181 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 181 atom CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 181 atom CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 181 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 181 atom CZ (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 181 atom OH (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 182 atom CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 182 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 183 atom CD (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 183 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 184 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 184 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 184 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 185 atom CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 185 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 186 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 186 atom CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 186 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 187 atom CE (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 187 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 187 atom SD (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 188 atom CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 188 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 189 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 189 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 189 atom CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 189 atom CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 189 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 189 atom CZ (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 190 atom CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 190 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 191 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 191 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 191 atom CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 191 atom CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 191 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 191 atom CZ (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 191 atom OH (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 192 atom OG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 193 atom CD (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 193 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 193 atom CZ (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 193 atom NE (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 193 atom NH1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 193 atom NH2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 194 atom CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 194 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 195 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 195 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 195 atom CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 195 atom CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 195 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 195 atom CZ (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 196 atom CD (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 196 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 196 atom NE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 196 atom OE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 197 atom CD (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 197 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 197 atom OE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 197 atom OE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 199 atom CD (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 199 atom CE (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 199 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 199 atom NZ (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 200 atom CD (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 200 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 200 atom CZ (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 200 atom NE (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 200 atom NH1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 200 atom NH2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 201 atom CD (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 201 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 201 atom NE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 201 atom OE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 202 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 202 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 202 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 203 atom CD (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 203 atom CE (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 203 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 203 atom NZ (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 204 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 204 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 204 atom CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 204 atom CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 204 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 204 atom CZ (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 205 atom SG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 206 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 206 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 206 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 207 atom CD (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 207 atom CE (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 207 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 207 atom NZ (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 208 atom CD (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 208 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 208 atom OE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 208 atom OE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 209 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 209 atom CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 209 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 209 atom ND1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 209 atom NE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 210 atom CD (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 210 atom CE (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 210 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 210 atom NZ (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 212 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 212 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 212 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 213 atom CD (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 213 atom CE (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 213 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 213 atom NZ (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 214 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 214 atom OG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 215 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 215 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 215 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 217 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 217 atom CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 217 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 218 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 218 atom CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 218 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 219 atom CE (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 219 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 219 atom SD (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 221 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 221 atom OG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 222 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 222 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 222 atom CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 222 atom CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 222 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 222 atom CZ (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 223 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 223 atom OG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 224 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 224 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 224 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 225 atom SG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 226 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 226 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 226 atom CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 226 atom CE3 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 226 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 226 atom CH2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 226 atom CZ2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 226 atom CZ3 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 226 atom NE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 227 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 227 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 227 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 228 atom CD (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 228 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 229 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 229 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 229 atom CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 229 atom CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 229 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 229 atom CZ (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 230 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 230 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 230 atom CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 230 atom CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 230 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 230 atom CZ (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 231 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 231 atom CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 231 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 232 atom CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 232 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 233 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 233 atom ND2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 233 atom OD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 234 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 234 atom CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 234 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 235 atom CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 235 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 236 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 236 atom CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 236 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 236 atom ND1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 236 atom NE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 237 atom CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 237 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 238 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 238 atom CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 238 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 239 atom CD (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 239 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 239 atom NE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 239 atom OE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 240 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 240 atom OD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 240 atom OD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 241 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 241 atom ND2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 241 atom OD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 242 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 242 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 242 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 243 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 243 atom CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 243 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 244 atom CD (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 244 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 244 atom CZ (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 244 atom NE (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 244 atom NH1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 244 atom NH2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 245 atom CD (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 245 atom CE (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 245 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 245 atom NZ (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 246 atom CD (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 246 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 246 atom OE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 246 atom OE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 247 atom CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 247 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 248 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 248 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 248 atom CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 248 atom CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 248 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 248 atom CZ (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 248 atom OH (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 249 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 249 atom CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 249 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 250 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 250 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 250 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 251 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 251 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 251 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 252 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 252 atom ND2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 252 atom OD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 253 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 253 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 253 atom CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 253 atom CE3 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 253 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 253 atom CH2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 253 atom CZ2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 253 atom CZ3 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 253 atom NE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 254 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 254 atom CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 254 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 256 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 256 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 256 atom CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 256 atom CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 256 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 256 atom CZ (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 256 atom OH (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 257 atom CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 257 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 258 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 258 atom ND2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 258 atom OD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 259 atom OG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 261 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 261 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 261 atom CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 261 atom CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 261 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 261 atom CZ (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 262 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 262 atom ND2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 262 atom OD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 263 atom CD (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 263 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 264 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 264 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 264 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 265 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 265 atom CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 265 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 266 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 266 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 266 atom CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 266 atom CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 266 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 266 atom CZ (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 266 atom OH (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 267 atom SG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 268 atom CD (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 268 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 268 atom CZ (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 268 atom NE (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 268 atom NH1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 268 atom NH2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 269 atom OG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 270 atom CD (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 270 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 271 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 271 atom OD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 271 atom OD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 272 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 272 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 272 atom CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 272 atom CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 272 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 272 atom CZ (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 273 atom CD (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 273 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 273 atom CZ (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 273 atom NE (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 273 atom NH1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 273 atom NH2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 274 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 274 atom CG1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 274 atom CG2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 276 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 276 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 276 atom CE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 276 atom CE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 276 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 276 atom CZ (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 277 atom CD (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 277 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 277 atom NE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 277 atom OE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 278 atom CD (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 278 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 278 atom OE1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 278 atom OE2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 279 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 279 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 279 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 280 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 280 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 280 atom CG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 281 atom SG (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 282 atom CD1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 282 atom CD2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 282 atom CG (trying to store temperature in PDBInfo)
protocols.hybridization.HybridizeProtocol: [ ERROR ] Sequence mismatch between input fasta and template /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb at residue 1
protocols.hybridization.HybridizeProtocol: [ ERROR ] Expected: P Saw: D
protocols.hybridization.HybridizeProtocol: [ ERROR ] THE PDB INFO IS NOT IN SYNC WITH THE FASTA. ATTEMPTING TO RESOLVE THE ISSUE AUTOMATICALLY
protocols.hybridization.HybridizeProtocol: score: 8300 identities: 95/319 gaps: 70/319
protocols.hybridization.HybridizeProtocol: target 1 PWQFSMLAAYMFLLIMLGFPINFLTLYV-TVQHKKLR--TPLNYILLNLAVADLFM----VFGGFTTTLYTSLHGYFVFGPTGCNLEGFFAT----LGGEIALWSLVVLAIERYVVVCKPM---SNFRFGENHA---IMGVAFTW-VMALACAAPPLVGWSRYIP-EGMQCSCGIDYYTPHEETNNESFV
IYMFVVHFIIPLIVIF-FCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFT--HQGSDFGPIFMTIPAFFAKTSAVY---NPVIYIMMNKQFRNCMVTTLC
protocols.hybridization.HybridizeProtocol: pose_seq 3 VWVVGMGIV-MSL-IVLA--IVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILMKMWT----FGNFWC--E--FWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTK--NKARVIILMV---WIVSGLTSFLPIQMHWYRATHQEAINC
YA--EETCCDFFTNQAYAIASSIVSFYVPL-VIMVFVYSR-VFQ--EAKRQLKFCLKEHKALK--TLG-IIMGTFTL-CWLP
FFIVNIVHVIQDNL-IRKEVYILLNWIGYVNSGFNPLIYCRSPD-FRIAFQELLC
protocols.hybridization.HybridizeProtocol:
protocols.hybridization.HybridizeProtocol: [ ERROR ] WARNING! Realignment removed 33 residues!
protocols.hybridization.HybridizeProtocol: [ ERROR ] Sequence mismatch between input fasta and template /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb at residue 1
protocols.hybridization.HybridizeProtocol: [ ERROR ] Expected: P Saw: V
ERROR: Issue validating template in HybridizeProtocol.
ERROR:: Exit from: src/protocols/hybridization/HybridizeProtocol.cc line: 1008
BACKTRACE:
/home/labusr/rosetta/main/source/build/src/release/linux/3.10/64/x86/gcc/4.8/default/libutility.so(utility::exit(std::string const&, int, std::string const&, int)+0x27f) [0x7f50705c148f]
/home/labusr/rosetta/main/source/build/src/release/linux/3.10/64/x86/gcc/4.8/default/libprotocols_b.5.so(protocols::hybridization::HybridizeProtocol::validate_template(std::string, std::string, std::shared_ptr<core::pose::Pose>, bool&)+0xcc9) [0x7f507ae272b9]
/home/labusr/rosetta/main/source/build/src/release/linux/3.10/64/x86/gcc/4.8/default/libprotocols_b.5.so(protocols::hybridization::HybridizeProtocol::parse_my_tag(std::shared_ptr<utility::tag::Tag const>, basic::datacache::DataMap&, std::map<std::string, std::shared_ptr<protocols::filters::Filter>, std::less<std::string>, std::allocator<std::pair<std::string const, std::shared_ptr<protocols::filters::Filter> > > > const&, std::map<std::string const, std::shared_ptr<protocols::moves::Mover>, std::less<std::string const>, std::allocator<std::pair<std::string const, std::shared_ptr<protocols::moves::Mover> > > > const&, core::pose::Pose const&)+0x24a5) [0x7f507ae297e5]
/home/labusr/rosetta/main/source/build/src/release/linux/3.10/64/x86/gcc/4.8/default/libprotocols.1.so(protocols::moves::MoverFactory::newMover(std::shared_ptr<utility::tag::Tag const>, basic::datacache::DataMap&, std::map<std::string, std::shared_ptr<protocols::filters::Filter>, std::less<std::string>, std::allocator<std::pair<std::string const, std::shared_ptr<protocols::filters::Filter> > > > const&, std::map<std::string const, std::shared_ptr<protocols::moves::Mover>, std::less<std::string const>, std::allocator<std::pair<std::string const, std::shared_ptr<protocols::moves::Mover> > > > const&, core::pose::Pose const&)+0x7a) [0x7f50750bfafa]
/home/labusr/rosetta/main/source/build/src/release/linux/3.10/64/x86/gcc/4.8/default/libprotocols.1.so(protocols::rosetta_scripts::RosettaScriptsParser::instantiate_mover(std::shared_ptr<utility::tag::Tag const> const&, basic::datacache::DataMap&, std::map<std::string, std::shared_ptr<protocols::filters::Filter>, std::less<std::string>, std::allocator<std::pair<std::string const, std::shared_ptr<protocols::filters::Filter> > > >&, std::map<std::string const, std::shared_ptr<protocols::moves::Mover>, std::less<std::string const>, std::allocator<std::pair<std::string const, std::shared_ptr<protocols::moves::Mover> > > >&, core::pose::Pose&)+0x15c) [0x7f50753cdbbc]
/home/labusr/rosetta/main/source/build/src/release/linux/3.10/64/x86/gcc/4.8/default/libprotocols.1.so(protocols::rosetta_scripts::RosettaScriptsParser::generate_mover_for_protocol(core::pose::Pose&, bool&, std::shared_ptr<utility::tag::Tag const>, utility::options::OptionCollection const&, std::shared_ptr<protocols::rosetta_scripts::XmlObjects>)+0x2937) [0x7f50753d31e7]
/home/labusr/rosetta/main/source/build/src/release/linux/3.10/64/x86/gcc/4.8/default/libprotocols.1.so(protocols::rosetta_scripts::RosettaScriptsParser::generate_mover_from_pose(core::pose::Pose&, std::shared_ptr<protocols::moves::Mover>&, bool, std::string const&, bool)+0xfc) [0x7f50753d75ac]
/home/labusr/rosetta/main/source/build/src/release/linux/3.10/64/x86/gcc/4.8/default/libprotocols.1.so(protocols::jd2::JobDistributor::run_one_job(std::shared_ptr<protocols::moves::Mover>&, long, std::string&, std::string&, unsigned long&, unsigned long&, bool)+0x1194) [0x7f5075480b44]
/home/labusr/rosetta/main/source/build/src/release/linux/3.10/64/x86/gcc/4.8/default/libprotocols.1.so(protocols::jd2::JobDistributor::go_main(std::shared_ptr<protocols::moves::Mover>)+0xc1) [0x7f5075481f71]
/home/labusr/rosetta/main/source/build/src/release/linux/3.10/64/x86/gcc/4.8/default/libprotocols.1.so(protocols::jd2::FileSystemJobDistributor::go(std::shared_ptr<protocols::moves::Mover>)+0x4a) [0x7f50754596ba]
/home/labusr/rosetta/main//source/bin/rosetta_scripts.linuxgccrelease() [0x403408]
/lib64/libc.so.6(__libc_start_main+0xf5) [0x7f506e5b6c05]
/home/labusr/rosetta/main//source/bin/rosetta_scripts.linuxgccrelease() [0x403d4b]
Error: [ ERROR ] ERROR: Exception caught by JobDistributor while trying to get pose from job 'S_0001'
Error: [ ERROR ]
[ ERROR ] EXCN_utility_exit has been thrown from: src/protocols/hybridization/HybridizeProtocol.cc line: 1008
ERROR: Issue validating template in HybridizeProtocol.
Error: [ ERROR ] Treating failure as bad input; canceling similar jobs
protocols.jd2.FileSystemJobDistributor: job failed, reporting bad input; other jobs of same input will be canceled: S_0001
protocols.jd2.JobDistributor: no more batches to process...
protocols.jd2.JobDistributor: 1 jobs considered, 1 jobs attempted in 4 seconds
Error: [ ERROR ] Exception caught by rosetta_scripts application:1 jobs failed; check output for error messages
Error: [ ERROR ]
[labusr@luxor scripts]$
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January 2, 2018 at 10:38 pm #13974
I would appreciate any help with this.
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January 8, 2018 at 3:09 pm #13980
Any help would be appreciated.
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January 15, 2018 at 11:25 pm #13990
On the issue with setup_RosettaCM.py in your first post, you need to make sure you match the names of all the sequences you’re using — and this includes capitalization. “5UCY” is different from “5ucy”. Another thing to keep in mind during the process is that Rosetta structure prediction pipelines like identifiers of 5-charachters (the four letter PDB code plus a chain identifier). They should be general, but they’re not always. If you’re having issues, try changing all your names to five-letter ones. (e.g. by padding four-letter or smaller ones with underscores.)
On your second issue, the key bit is the following
[ ERROR ] Sequence mismatch between input fasta and template /home/labusr/Ahmad/Rosetta/CM/Test/2rh1.pdb at residue 1
[ ERROR ] Expected: P Saw: VIf I had to guess, I’m guessing you’re running things with the structures from before the threading, rather than with threaded structures. — Once you’re done with the threading step, you’re done with the original templates (and the Grishin alignments) — you should use the output of the threading step for the rosetta_scripts hybridization step.
If this is not the issue, then something happened with your threading step. When you’re doing threading, be sure that the sequences you use match up exactly — the template sequence in the Grishin alignment should match exactly to the sequences that’s actually in the template PDB, and the target sequence should match exactly to the sequences which is in the fasta file. And the fasta file for threading should be identical to the fasta file that’s used for the rosetta_scripts Hybridization stage.
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