Docking the border segments of coiled coils in parallel orientation

Member Site Forums Rosetta 3 Rosetta 3 – Applications Docking the border segments of coiled coils in parallel orientation

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      Anonymous

        Dear Sir or Madam,

        I need to dock the border segments of two coils (from four ones) from each of two homotetramers in a parallel orientation (I mean, that docked helix bundles should lay in one direction).

        I would like to find out, which kind of files should I use and/or parameters in that files should I write for docking these segments in a proper way?

        I will be sincerely grateful for your responses and advises and I am looking to it.

        Best regards,

        Corvin.

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