error in installing rosetta for use in phenix

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    • #3705
      Anonymous

        Hi everybody!

        I’m trying to install Rosetta (version 3.10) for use in Phenix on Ubuntu 20. No problem with Phenix installation, but when I run “rosetta.build_phenix_interface nproc=2” I got the following:

        Substituting phenix.python into build shell scripts

          update_options.sh

          update_ResidueType_enum_files.sh

          Phenix modules found : /home/stefano/programmi/phenix-1.19.1-4122/modules/phenix

        False

        /home/stefano/programmi/rosetta/rosetta_src_2018.33.60351_bundle/main/source

          ~> phenix.python scons.py bin mode=release extras=python  -j 1

        scons: Reading SConscript files …

        Traceback (most recent call last):

          File “/home/stefano/programmi/rosetta/rosetta_src_2018.33.60351_bundle/main/source/SConstruct”, line 150, in main

            build = SConscript(“tools/build/setup.py”)

          File “/home/stefano/programmi/rosetta/rosetta_src_2018.33.60351_bundle/main/source/external/scons-local/scons-local-2.0.1/SCons/Script/SConscript.py”, line 614, in __call__

            return method(*args, **kw)

          File “/home/stefano/programmi/rosetta/rosetta_src_2018.33.60351_bundle/main/source/external/scons-local/scons-local-2.0.1/SCons/Script/SConscript.py”, line 551, in SConscript

            return _SConscript(self.fs, *files, **subst_kw)

          File “/home/stefano/programmi/rosetta/rosetta_src_2018.33.60351_bundle/main/source/external/scons-local/scons-local-2.0.1/SCons/Script/SConscript.py”, line 260, in _SConscript

            exec _file_ in call_stack[-1].globals

          File “/home/stefano/programmi/rosetta/rosetta_src_2018.33.60351_bundle/main/source/tools/build/setup.py”, line 451, in <module>

            build = setup()

          File “/home/stefano/programmi/rosetta/rosetta_src_2018.33.60351_bundle/main/source/tools/build/setup.py”, line 441, in setup

            build.options_requested, build.options = setup_build_options()

          File “/home/stefano/programmi/rosetta/rosetta_src_2018.33.60351_bundle/main/source/tools/build/setup.py”, line 109, in setup_build_options

            naive_settings = setup_build_settings(requested)

          File “/home/stefano/programmi/rosetta/rosetta_src_2018.33.60351_bundle/main/source/tools/build/setup.py”, line 166, in setup_build_settings

            supported = Settings.load(“basic.settings”, “settings”)

          File “/home/stefano/programmi/rosetta/rosetta_src_2018.33.60351_bundle/main/source/tools/build/settings.py”, line 130, in load

            execfile(file, settings)

          File “basic.settings”, line 61, in <module>

        IndexError: list index out of range

        scons: done reading SConscript files.

        scons: Building targets …

        scons: *** Do not know how to make File target `bin’ (/home/stefano/programmi/rosetta/rosetta_src_2018.33.60351_bundle/main/source/bin).  Stop.

        scons: building terminated because of errors.

         

         

        I copied the suggested site.setting ìs file in ${PHENIX_ROSETTA_PATH}/main/source/tools/build/site.settings for the ABI change before running the command.

        I also tried installing “python-is-python2” package, but I got the error…

        Any suggestions?

        Thanks

        Stefano

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