Reply To: Backbone didn’t change in docking, why?

Hi,
I’m using Rosetta3.1 API to write my own protocol now. In Rosetta3.1, we need to tell docking mover the loops range of pose, then the mover can perturb the downstream partner and sample backbone conformation of loops by a loopMover, followed repack and minimize the region we defined by movemap. So if we apply a docking mover to a pose without loops defined, the mover will not sample backbone conformation.