Reply To: Build Error, ubuntu 10.10, scons 2.0, python 2.6.6 and gcc 4.4.5, truncation

Usually, when you get to the “scons: done building targets.”, this is it, you completed the compile with success
Your link to the abinitio executable sould be:
rosetta_source/bin/AbinitioRelax.linuxgccrelease
Than, it’s a matter of preparing your files, setting your flags file, and run:
rosetta_source/bin/AbinitioRelax.linuxgccrelease @filename.flags