Cluster Error

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    • April 26, 2010 at 7:06 am #605
      Anonymous

        Dear All,

        I am try to cluster 4,500 abinitio predicted decoys. The length is 295 aa.

        I meet this error:
        terminate called after throwing an instance of ‘std::bad_alloc’
        what(): St9bad_alloc

        I find similar problem reported by others. However, no pratical suggestion is provided.

      • April 26, 2010 at 1:34 pm #4435
        Anonymous

          This means the program failed to properly allocate memory. Chances are good it means you flat out ran out of memory on the computer running the clustering. Try again on a computer with more memory?

          • April 27, 2010 at 3:49 am #4436
            Anonymous

              > This means the program failed to properly allocate memory. Chances are good it means you flat out ran out of memory on the computer running the clustering. Try again on a computer with more memory?

              Smlewis,

              Thank you a lot for the kindly reply!

              I will try to write a script to filter out decoys with bad scores to reduce the size of the input silent file.

              Justin

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