Hi,
Binding score is calculated as the total score of complex minus the sum of the scores of unbound two partners, should I repack the side-chain of two partners after seperate the complex, or just score them without repacking?
Is there a Rosetta application that can repack side chains? I’d like to do this to calculate binding energy (as described in this question), but since I’m not a Rosetta developer, I’d prefer not to have to write my own application.
Is it possible to use the existing Rosetta applications to repack side chains?
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