The scripts and input files that accompany this demo can be found in the demos/public directory of the Rosetta weekly releases.


Compatible with the Rosetta SVN code repository after the Revision 51602

~/rosetta/rosetta_source/bin/rosetta_scripts.linuxgccrelease -s ./input.pdb -parser:protocol ./input.xml -nstruct 100 -ex1 -ex2aro

To run a short, testable version:

$> <path/to/rosetta/source>/bin/rosetta_scripts.linuxgccrelease -s input.pdb -parser:protocol input.xml -nstruct 10

Principles for designing ideal protein structures Nobuyau Koga, Rie Tatumi-Koga, Gaohua Liu, Rong Xiao, Thoma B. Acton, Gaetano T. Montelione, and David Baker Nature 2012, Supplementary Data