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Author: Jared Adolf-Bryfogle (jadolfbr@gmail.com) This metric calculates the RMSD between the input and the set comparison pose. You may use the cmd-line native if the option use_native is true. Default is to calculate all_heavy atoms - but this can be set using the option rmsd_types.
We match all corresponding atoms for each residue to match. By default we do not fail and are robust to length mismatches - only matching what we can for each residue.
<RMSDMetric name="(&string;)" custom_type="(&string;)"
reference_name="(&string;)" residue_selector="(&string;)"
residue_selector_ref="(&string;)" residue_selector_super="(&string;)"
residue_selector_super_ref="(&string;)" robust="(true &bool;)"
use_native="(false &bool;)" super="(false &bool;)"
cyclic="(false &bool;)" rmsd_type="(&rmsd_types;)" />