Member Site › Forums › Rosetta++ › Rosetta++ – General › How to reconstruct full atom structure from silent file › Reply To: How to reconstruct full atom structure from silent file
June 26, 2008 at 6:50 pm
#3986
I guess you meant -fa_output.
I tried this and it does not work with -extract but it does work with the -refold -score which extract.pl uses. So the final rosetta command which works looks like that:
rosetta.gcc -refold -score -fa_output -scorefile test -silent_input -nstruct 1 -s test.out -l tagfile
Thanks a lot for a hint!
> I believe that if you use the command-line flag -fa_input flag, rosetta++ will extract
> full-atom coordinates. If that doesn’t work, please let me know
>