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November 19, 2008 at 4:22 pm
#4030
Having a GTP molecule present durng docking is not possible in the current version of RosettaDock.
Aroop
> Hi all,
>
> I am trying to dock a GTP-bound GTPase to another protein. The problem is that apparently RosettaDock does not recognize GTP. I do not want to delete GTP, as I am doing flexible backbone docking, and so deleting GTP might result in wrong structures. I appreciate any help. Thank you so much in advance.
>
> mbh