Reply To: GTP-bound proteins

Member Site › Forums › Rosetta++ › Rosetta++ – General › GTP-bound proteins › Reply To: GTP-bound proteins

November 19, 2008 at 4:22 pm #4030
Anonymous

    Having a GTP molecule present durng docking is not possible in the current version of RosettaDock.

    Aroop

    > Hi all,
    >
    > I am trying to dock a GTP-bound GTPase to another protein. The problem is that apparently RosettaDock does not recognize GTP. I do not want to delete GTP, as I am doing flexible backbone docking, and so deleting GTP might result in wrong structures. I appreciate any help. Thank you so much in advance.
    >
    > mbh