Member Site › Forums › Rosetta 3 › Rosetta 3 – General › ligand dock residue selection › Reply To: ligand dock residue selection
August 12, 2009 at 5:13 pm
#4147
Anonymous
As far as sidechains go, the resfile is respected by most applications. I’ve never tried ligand docking but I’d be surprised if it did not respect the resfile. Let me know what you find.
As far as backbone torsional degrees of freedom…that’s a tougher problem. Loop modeling lets you choose your loops, other than that protocols typically choose freedoms internally.