Member Site Forums Rosetta++ Rosetta++ – General Pose Docking Reply To: Pose Docking


    What is the command line that you are using? Does the second partner undergo any changes in backbone conformation? Or is it just moving in rigid-body position/orientation?

    In standard fix-bb docking, the first partner is always entire un-perturbed, but in flexible docking with both partners flexible, the first partner’s backbone conformation should change, if only slightly.

    – Sid