Member Site Forums Rosetta 3 Rosetta 3 – General database Reply To: database


    > Anyone knows the right database to download from the ncbi site?
    > The link in the rosetta tutorial is broken. I know that’s the nr one, but fasta formated or
    > any input on this?
    > thank you
    > tiago

    You can use UniRef90 from Fasta formated and you a have to run formatdb for setting up the psiblast database files. Just rename the UniRef90 fasta to nr and run

    ‘/my/blast/installation/formatdb -o T -i nr’

    David K