My initial (simple minded) idea was that one might dump a pose to a pdb as a string and then use the PyMol’s read_pdbstr as a easy way to ‘refresh’ the structure displayed in PyMol after its been altered with PyRosetta.
I’ll try to test the PyRosetta-PyMol script after I compile a PyMol with Python 2.5.
> Is there a way to dump a pdb to an object instead of a file?
> This would allow a script running inside PyMol to update the displayed structure.
> If I’m missing something obvious a pointer in the right direction would be appreciated…