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September 3, 2010 at 2:01 pm
#4597
Anonymous
Yes – use the OptE protocol. It’s not published or released. Someone’s supposed to be writing a paper on it, but it’s not yet close to publication. Recent or soon-to-be-published publications from the Baker lab (look for Kellogg in the author list) touch on this as well.
If you just want to know what the weights ARE, look in (database)/scoring/weights. You can change these files as you please to test different weights.