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#4615
Anonymous

    hah,I have solved the problem.
    open the make.system file at the nnmake dir,
    delete the L67 like this: $FOPTIMFLAGS=-o -ffast-match -malign-double ,just add # at the front.
    [HengZheng@localhost nnmake]$ $make
    the compileing is ok!!
    then type ./pNNMAKE.gnu at the terminal;
    1./
    2./
    3./
    4/net/shared/nnmake_database/
    5./
    6./
    7./
    8./
    9./
    10./
    11./
    12./
    13/scratch/shared/nnmake_database/
    14./
    15./
    16./
    17./
    NNMAKE requires three arguments
    prefix code (char*2),
    pdb name in lowercase (char*4)
    chain name (char*1, ‘_’ for none)
    e.g. ‘pNNMAKE ta 1ubq _ ‘

    4 arguments required for forcing barcodes:
    pNNMAKE code pdbname chain -barcode_file file
    OR tries pdbnamechain.bar

    4 arguments required for making loop libraries:
    pNNMAKE code pdbname chain zone_file
    OR
    pNNMAKE code pdbname chain -zonelist filename

    NOTE: zone files should be base name for zones,
    template pdb, template ssa, and loop files