Member Site › Forums › Rosetta 3 › Rosetta 3 – General › about constraints › Reply To: about constraints
March 1, 2011 at 2:42 am
#5094
Anonymous
“The new energy terms will be added in the form of “cst_weight*f(x)”?”
I think you can set different weights for AtomPair, Angle, and DihedralConstraints (I’m not 100% sure). Either way, you get only one weight for all AtomPairConstraints, so it’s weight*(f1(x1) + f2(x2) + …), instead of having separate weights for each.
“Does the Relax mode modifies the residues in alpha-helices?”
Yes, for some meanings of “modify”. It will not change their sequence and is unlikely to unfold them given a reasonable starting structure.