Member Site Forums Rosetta 3 Rosetta 3 – General about constraints Reply To: about constraints


    “The new energy terms will be added in the form of “cst_weight*f(x)”?”

    I think you can set different weights for AtomPair, Angle, and DihedralConstraints (I’m not 100% sure). Either way, you get only one weight for all AtomPairConstraints, so it’s weight*(f1(x1) + f2(x2) + …), instead of having separate weights for each.

    “Does the Relax mode modifies the residues in alpha-helices?”
    Yes, for some meanings of “modify”. It will not change their sequence and is unlikely to unfold them given a reasonable starting structure.