Reply To: a trouble during floppytail modeling

[Anonymous]

Excuse me, I have an updating problem on evaluating the results.
In your that published Cell paper, I saw you sorted these candidate models by measuring their binding energy. However, this function seemed to be restricted to docking part, so whether you built and picked out optimized model mainly by ab initio and docking simulation, and then by floppytail only for confirmation. If not, could you share with us how you calculated the binding energy as well as their respective monomers’ energy in the complex?
If I missed some obvious flags to achieve it, please forgive me.

Thanks very much.