Member Site Forums Rosetta 3 Rosetta 3 – General loop model error Reply To: loop model error


    Thanks a lot for your kind reply.
    In fact, the first residue in my PDB file is number one, so the number is consistent with actually it is… There are 300 aa in the PDB file, so 165-176 is make sense. I don’t know why it still says:


    loops: ERROR invalid loop 165 176 0: End more than nres(0)
    ERROR: LoopRebuild::ERROR Loop definition out of boundary
    ERROR:: Exit from: src/protocols/loops/ line: 594

    BTW, I put the option -database /soft/rosetta-3.2.1/database in kic.options file, rosetta cannot recognize it. While it works when it specify in command line