Reply To: some application troubles when using resfile flag

[Anonymous]

Thank you very much.
I have fixed the first problem. I would like to share with others. The way to achieve that was, generally like smlewis` suggestion:
Just to keep CA, in the residue type column into __CA format(other normal residue was in the format like _ALA).
Then, in my case, my Ca ions was isolated from other residues by TER and listed in the end, so I deleted TER line and made sure enumeration consistently, (because I omitted TER line just now) otherwise there would be a segmentation error.

Now I am dealing with the second one, and still confused how to see the help information… could it be clicking `python molfile_to_params.py -h` ? But it had syntax error. Could anyone give any hints? How about the commands to see the help?

Thanks a lot.