Reply To: How to relax only one domain of a protein and keep the rest of them fixed

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April 14, 2011 at 4:31 pm #5411
pbradley
Participant

    It doesn’t work with PyRosetta 2 as I think they’ve changed the API.

    I suspect there’s some problem with your input PDB format on the loop that is missing – does it have occupancy values that are 0.00?

    If there’s a way of doing what my script is doing with Rosetta 3.2 applications then I’d like to try it but I didn’t manage to find it so that’s why I started playing with PyRosetta.