Reply To: Problem with Parallel installation of Rosetta3.2

[Anonymous]

Hello smlewis,

Thanks for the reply. Using the flag “extras=static,mpi” worked and the installation was done!
Now for submitting job using a SGE script I am using the following commands:

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#$ -S /bin/bash
#$ -q batch
#$ -N Rosetta_MPI
#$ -pe mvapich2 2
#$ -cwd
#$ -V
#$ -o /home/rosetta/rosetta_home/user/OUT
#$ -e /home/rosetta/rosetta_home/user/ERR

/opt/mvapich2-1.0.2/bin/mpirun -machinefile $TMPDIR/machines -np $NSLOTS /home/rosetta/Softwares/installed/Rosetta3.2/rosetta_mpi/rosetta_source/bin/AbinitioRelax.staticmpi.linuxgccrelease @/home/rosetta/rosetta_home/user/flags

---

But the job is not getting submitted, nor any error file is generated.
Any suggestion to solve this would really help.

Regards,

Anirban