Member Site › Forums › Rosetta 3 › Rosetta 3 – Applications › flexpep docking problem—–How to do with phosphorylation peptide? › Reply To: flexpep docking problem—–How to do with phosphorylation peptide?
June 2, 2011 at 9:32 pm
#5696
Anonymous
In the Prepack step, it works fine.
But in the docking step,error happens as “can not find a residue type that matches the residue SER_p:phosphorylateda….”
And in the prepacked pdb files, the p-Ser is still “SER”, but there is one line starts with “
SER_p:phosphorylated_***
ERROR: switch_to_residue_type_set fails
ERROR:: Exit from: src/core/chemical/util.cc line: 645
” and I think this is corresponding to my errors.
ANyone has any suggestions?