Reply To: How to define specific residues in alascan ?

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June 21, 2011 at 4:24 am #5795
Anonymous

    Thanks for the reply! At that time I found that the -resfile option worked well with RepackMinimize script (That’s why I modified the question). However, after I performed the docking.xml (simplified script derived from rosetta_deomos/Docking_Design_Scripting/docking.xml of Rosetta 3.1) with my protein structure, it was observed that the hydrophobic core region is exposed maybe due to the packing failure. Is there any reference that describes the detailed actions of RepackMinmize mover?

    Thanks in advance!