Reply To: Problem running Pyrosetta on RedHat/CentOS 5

[Anonymous]

Thanks for the help Sergey.

[jadolfbr@hpccluster ~]$ python -V
Python 2.5.6

After some digging around, it looks like the error was due to pointing of python to a 32bit build through a local bashrc. So, that error is gone.

However, now I get this:

Python 2.5.6 (r256:88840, Jun 16 2011, 08:26:50)
[GCC 4.1.2 20080704 (Red Hat 4.1.2-48)] on linux2
Type “help”, “copyright”, “credits” or “license” for more information.
>>> from rosetta import *
>>> rosetta.init()
Found minirosetta_database at /common/madsci/PyRosetta/Program/PyRosetta-r40251.linux.64Bit/minirosetta_database, using it…
Traceback (most recent call last):
File ““, line 1, in
File “/common/madsci/PyRosetta/Program/PyRosetta-r40251.linux.64Bit/rosetta/__init__.py”, line 523, in init
v.extend(args)
File “/common/madsci/PyRosetta/Program/PyRosetta-r40251.linux.64Bit/rosetta/__init__.py”, line 105, in extendfunc
for i in othervec: vec.append(i)
Boost.Python.ArgumentError: Python argument types in
vector1_string.append(vector1_string, str)
did not match C++ signature:
append(utility::vector1 > {lvalue}, std::string)