Reply To: Deprotonated LYS

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June 23, 2011 at 8:27 pm #5808
Anonymous

    The three letter code is LYS.

    I don’t know if pyrosetta comes with a separate database or not – if you open up the file I mentioned in my previous post, you can rename its three letter code to LYD (or whatever), then name the residue in your PDB the same thing; that might work.