Reply To: rosetta protein protein docking start up

[Anonymous]

Dear Wieztner, Thanks a lot.

I want to dock model_2.pdb on compx.pdb (fixed),

I did run the following commands,

~/Downloads/ros1/rosetta_source/bin/docking_protocol.linuxgccrelease -database /home/Downloads/ros1/rosetta_database -s ../../pdb/model_2.pdb compx.pdb

Got the following error message ?

protocols.jd2.PDBJobInputter: filling pose from PDB ../../pdb/model_2.pdb
protocols.docking.DockingProtocol: Setting docking foldtree
protocols.docking.DockingProtocol: old fold tree: FOLD_TREE EDGE 1 98 -1
protocols.docking.DockingProtocol:

ERROR: cutpoint
ERROR:: Exit from: src/protocols/docking/util.cc line: 91
> ~/Downloads/ros1/rosetta_source/bin/docking_protocol.linuxgccrelease -database /home/Downloads/ros1/rosetta_database -s ../../pdb/model_2.pdb compx.pdb

any help? Thanks.