activation of filters in rosetta3.0 or later

Member Site Forums Rosetta 3 Rosetta 3 – General activation of filters in rosetta3.0 or later

  • This topic has 2 replies, 2 voices, and was last updated 15 years ago by Anonymous.
Viewing 2 reply threads
  • Author
    Posts
    • #391
      Anonymous

        Hey:

        While carrying out the full atom refinement, there was a strategy in Rosetta version prior to 3.0 which helped to terminate refinements if the models did not reach a certain energy by a certain stage.

        Could someone tell how that kind of strategy so called “filter” can be activated in Rosetta3.0 or later?

      • #4266
        Anonymous

          There is a flag “abinitio::use_filters” to activate the filters. The filters themselves seem to be RGFilter, COFilter, and SheetFilter. I don’t know any more than that, but -help for the executable might have more. You can see the filters themselves at protocols/filters if you want to try to change their default values.

        • #4269
          Anonymous

            > Hey:
            >
            > While carrying out the full atom refinement, there was a strategy in Rosetta version prior to 3.0 which helped to terminate refinements if the models did not reach a certain energy by a certain stage.
            >
            > Could someone tell how that kind of strategy so called “filter” can be activated in Rosetta3.0 or later?
            >
            >

            I am using the AbinitioRelax.linuxgccrelease executable.

        Viewing 2 reply threads
        • You must be logged in to reply to this topic.