Member Site › Forums › Rosetta 3 › Rosetta 3 – General › error running rosetta3.0
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pbradley.
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June 10, 2009 at 8:57 pm #474
Anonymous
Hi, I am new to Rosetta. I downloaded and built Rosetta3.0 today with the supplied scons.py script. It finished without any errors. Afterwards, I tried running AbinitioRelax.linuxgccrelease and I got the following error:
error while loading shared libraries: libprotocols.so: cannot open shared object file: No such file or directory
I’m not sure if this is a dependency issue or maybe I don’t have full permissions to those libraries (I just built this locally in my home directory). I am not the most linux savvy person out there, so maybe this is a relatively easy thing to fix. I noticed someone had this same problem (was posted in the other section) and no one was able to help.
Any ideas would be helpful. Thanks.
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June 12, 2009 at 9:51 am #4098
> Hi, I am new to Rosetta. I downloaded and built Rosetta3.0 today with the supplied scons.py script. It finished without any errors. Afterwards, I tried running AbinitioRelax.linuxgccrelease and I got the following error:
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> error while loading shared libraries: libprotocols.so: cannot open shared object file: No such file or directory
>
> I’m not sure if this is a dependency issue or maybe I don’t have full permissions to those libraries (I just built this locally in my home directory). I am not the most linux savvy person out there, so maybe this is a relatively easy thing to fix. I noticed someone had this same problem (was posted in the other section) and no one was able to help.
>
> Any ideas would be helpful. Thanks.I think your problem is it can’t find libprotocols.so because it is not in the shared library path.
I solved this by adding to my .bashrc file:
LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/data/home/apps/rosetta3/rosetta3_source/build/src/release/linux/2.6/64/x86/gcc
export LD_LIBRARY_PATH
of course you would have to change the path /data/home/apps/rosetta3/rosetta3_source/ to where you have installed rosetta on your system.
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