Hi Rosetta community,
After finally getting the CS-HM-Rosetta run to successfully generate structures, now I’m at the point where I want to select the lowest energy structure among generated structures which suppose to be the closest to the native structure. But in this website:
https://www.rosettacommons.org/demos/latest/public/clustering/README
there’re no instructions on plotting.
According to the CS-HM-Rosetta Supporting Information seen here: http://www.pnas.org/content/suppl/2012/05/31/1202485109.DCSupplemental/pnas.1202485109_SI.pdf#SF4
The 10 lowest-energy out- put pdb files can be extracted from the silent-format file using cm_scripts/bin/silent_extract_lowscore.pl but I didn’t have this file.
Am I missing something? Someone could help me?
I would appriciate your advice.
Thanks!
.
