How to fold-and-dock in PyRosetta?

Member Site Forums PyRosetta PyRosetta – General How to fold-and-dock in PyRosetta?

Viewing 0 reply threads
  • Author
    Posts
    • #3421
      Anonymous

        I’d like to do something similar to regular Rosetta fold-and-dock but in PyRosetta.  I’ve looked at D060_Folding.py and D100_Docking.py examples and while I (mostly) understand what each is doing, I have no idea how to combine them.

        How to get a foldtree with symmetry? (in my case it’s just simple C3) 

        How to combine folding and docking?  Just alternate calls to folding.apply(test_pose) and dock_prot.apply(test_pose)?  (It can’t be that simple…)

        It would be really nice to have an official fold-and-dock example – if someone can get me started I can build it up into a complete script.

        Thanks!

    Viewing 0 reply threads
    • You must be logged in to reply to this topic.