Interface Analyzer with Glycans

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    • #3456
      Anonymous

        Hello all, 

                    Is it possible to run InterfaceAnalyzer with a structure with Glycans? Everytime I apply the InterfaceAnalyzerMover on my structure I get a segmentation fault. If I just delete the carbohydrates it works just fine. The pose has been processed with all of the usual flags(below). Is there some trick to using glycans and InterfaceAnalyzerMover or can someone point me in the right direction? Thanks so much.

                                                                                                                Drew

         

         


        -ignore_unrecognized_res
        -ignore_zero_occupancy false
        -maintain_links
        -include_sugars
        -alternate_3_letter_codes pdb_sugar
        -load_PDB_components false
        -auto_detect_glycan_connections
        -write_glycan_pdb_codes

         

      • #15363
        Anonymous

          Are the glycans part of the same chain or chain group as they are attached to in the interface definition (the `AB_C` like line) ?

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