Is the tools such as “r_pdb2top” “r_broker.linuxgccrelease” still available?

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    • October 31, 2016 at 2:00 am #2534
      Anonymous

        Dear All:

         

        I’m just begin to use Rosetta and following demos like ” demos/protocol_capture/broker/ubq   ” ” demos/protocol_capture/topology_broker_gpcr “

         

        Those examples call the “r_pdb2top”  “r_broker.linuxgccrelease” , however, it seems those no longer exist in the current version I got (rosetta_bin_linux_2016.32.58837_bundle)

         

        It would be great if anyone knows which version still has those commands, or which commands has similar function.

         

        Thanks in advance! :)

         

        Guang

         

      • November 14, 2016 at 10:09 pm #11953
        Anonymous

          These two applications are in the unreleased developer-only “pilot” applications (from what I can tell, they were never publically released.)

          For r_broker, you can substitute with the minirosetta application, with the additional options `-run::protocol broker`.

          For r_pdb2top, there unfortunately doesn’t seem to be a publically released equivalent. — But where is it being called from? I’m not seeing it being used in the version of the demos that I have.

        • November 14, 2016 at 10:09 pm #12474
          Anonymous

            These two applications are in the unreleased developer-only “pilot” applications (from what I can tell, they were never publically released.)

            For r_broker, you can substitute with the minirosetta application, with the additional options `-run::protocol broker`.

            For r_pdb2top, there unfortunately doesn’t seem to be a publically released equivalent. — But where is it being called from? I’m not seeing it being used in the version of the demos that I have.

          • November 14, 2016 at 10:09 pm #12995
            Anonymous

              These two applications are in the unreleased developer-only “pilot” applications (from what I can tell, they were never publically released.)

              For r_broker, you can substitute with the minirosetta application, with the additional options `-run::protocol broker`.

              For r_pdb2top, there unfortunately doesn’t seem to be a publically released equivalent. — But where is it being called from? I’m not seeing it being used in the version of the demos that I have.

            • November 15, 2016 at 8:26 pm #11966
              Anonymous

                Thank you ! I’ll try  -run::protocol broker, for the r_pdb2top , I think I won’t need it in future as I found a way to go around it :)

                Thank you rmoretti !

              • November 15, 2016 at 8:26 pm #12487
                Anonymous

                  Thank you ! I’ll try  -run::protocol broker, for the r_pdb2top , I think I won’t need it in future as I found a way to go around it :)

                  Thank you rmoretti !

                • November 15, 2016 at 8:26 pm #13008
                  Anonymous

                    Thank you ! I’ll try  -run::protocol broker, for the r_pdb2top , I think I won’t need it in future as I found a way to go around it :)

                    Thank you rmoretti !

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