Dear all,
i’m running FunFolDes .
https://github.com/LPDI-EPFL/FunFolDesData/blob/9cdbcbc3e12b65701656ccc1676f74eafcec532c/03.designs/1kx8/design/fold_design.xml
but want to rewrite it for new scoring function and new BUNS.
this post has new scoring function, but ignores BUNS https://www.rosettacommons.org/docs/latest/scripting_documentation/RosettaScripts/composite_protocols/fold_from_loops/RunningFunFolDes
old Buns were
<BuriedUnsatHbonds name=”BUNS” jump_number=”0″ confidence=”0″
task_operations=”FFLMOTIF_TASKOP,FFLFLEX_TASKOP,FFLTEMPLATE_TASKOP” />
Would it be ok to take VBUNS (new very buried unsats) instead of old Buns ?https://www.rosettacommons.org/docs/latest/scripting_documentation/RosettaScripts/Filters/filter_pages/BuriedUnsatHbondsFilter
<BuriedUnsatHbonds name=”BUNS” report_all_heavy_atom_unsats=”true” scorefxn=”beta” ignore_surface_res=”false”print_out_info_to_pdb=”false” atomic_depth_selection=”5.5″ burial_cutoff=”1000″ confidence=”0″ task_operations=”FFLMOTIF_TASKOP,FFLFLEX_TASKOP,FFLTEMPLATE_TASKOP” />
thank you very much!
.
