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Hi Dear Rosetta Users/Developer
I have 1000 3-mer peptide sequence like as GSH, SAD, GPN, PWW, …
Now, I would like to build them in a fast way using Rosetta scripts.
Would you please advise me on how to do it?
I will be grateful for any help.
You can use PyRosetta to get the job done!
here is the piece of code for that,
peptide = Pose()
peptide = pose_from_sequence(str(sys.argv),”fa_standard”)
You may also be able to use the BuildPeptide application (https://www.rosettacommons.org/docs/latest/application_documentation/utilities/build-peptide), if you want to stick with the commandline version of Rosetta.