RoseTTaFold

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    • October 7, 2021 at 12:27 pm #3851
      Anonymous

        Hi,

        Just a clarification about RoseTTaFold (https://github.com/RosettaCommons/RoseTTAFold):

        Does it need pyRosetta in order to work properly?

        I’m asking it becuase there are 2 diff. software licenses .

        Thanks

        Oz

      • October 7, 2021 at 12:42 pm #16035
        Anonymous

          Hi Oz,

          As described in the RoseTTAFold documentation, the package includes two piplines-

          One using PyRosetta and one that doesn’t.

          For the pyrosetta version, user will get five final models having estimated CA rms error at the B-factor column (model/model_[1-5].crderr.pdb).

          For the end-to-end version, there will be a single PDB output having estimated residue-wise CA-lddt at the B-factor column (t000_.e2e.pdb).

          So the answer to your question depends on which pipline you are planning on using.

        • October 7, 2021 at 9:25 pm #16039
          Anonymous

            Thanks

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