ROSIE FAQ

This topic has 6 replies, 7 voices, and was last updated 4 years ago by Anonymous.

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- April 8, 2013 at 5:41 pm #1551
  Anonymous
  Q: I would like to use on ROSIE server but our data is highly sensitive. I saw the job privacy setting that allow me to keep job data not visible to others but could you guarantee that it will not be accessed by third parties, shared, or accidentally became public?
  
  A: No, we can not provide such guarantee. When submitting a ROSIE job please take in to account that there is always a possibility that your data might be used for debug purposes, or get accidentally exposed due to a software bug. if you selected ‘keep my job data private’ checkbox during submission we would make sure to not share your data intentionally but this still could happend due to bugs or circumstance thats not under our control. We work hard to prevent such accidental exposure but no software is perfect. So if you are dealing with confidential data please consider acquiring Rosetta source code to run locally instead.
  
  === ANTIBODY App ===
  Q: Out of 10 best model structure of variable region which could be the best one and on what basis could we select that one?
  
  A: We do not know which is best! They are ranked by energy, but this is an imperfect measure. It would be best if you could visually inspect them and use your knowledge of your antibody to choose the best model or models for use. Please note that you can dock all ten models simultaneously with our EnsembleDock methods.
- November 15, 2015 at 3:39 pm #11326
  Anonymous
  Dear All,
  
  Each time when I tried to submit a job to Make_Exemplar, without loading any file it always gave error message “
  
  Submitting Make_Exemplar job…
  
  Submitting Make_Exemplar job failed!
  
  “
  
  The pagescreen with the error message was attached.
  
  Will you please tell me how to successfully submit a job to Make_Exemplar?
  
  Brett
- March 16, 2018 at 8:06 am #14129
  Anonymous
  The same thing happened to me as above, while I try to submit a job in docking2, and I noticed the latest tips are one-year ago.
  
  Is anybody here?
  
  Submit a new Docking job
  
  Submitting Docking job…
  
  Submitting Docking job failed!
  - March 19, 2018 at 7:22 pm #14144
    Anonymous
    Please start a new thread for this issue, rather than using the FAQ thread.
    
    When you do so, if you could also provide the settings you’re attempting to use and any input files, that may help.
- March 22, 2019 at 12:01 am #14611
  Anonymous
  Hi
  
  I have a problem submiting a job in ROSIE. Each time when I tried to submit a job apear:
  
  Submitting Docking job…
  
  Submitting Docking job failed!
  
  What should I Do?
  
  Salvador
  - December 19, 2020 at 6:40 am #15658
    Anonymous
    Hi，
    
    I also meet this problem. Could tell me how did you solved it? Thank you very much.
    
    YYJ
- February 18, 2020 at 4:12 pm #15159
  Anonymous
  Hi.
  
  I am a user of Robetta and I would like to do molecular docking by peptiderive and I need to submit my two proteins but I can submit only one? how about submitting the other one? I have two globular proteins to interact
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