Hello,
I tried running snugdock on ROSIE. The run finished and when I downloaded the output files from the server, I got this messge in the output.json file:
{
“cpu_usage”: 0.7474999999999999,
“docked_proteins”: [],
“essential”: [
“trigger-00000.prepack_trigger/proteins_prepacked.pdb”,
“trigger-00001.snug_dock_trigger/score.sf”
],
“log”: “nCould not find essential file trigger-00000.prepack_trigger/proteins_prepacked.pdb in DB!n”,
“prepak.pdb”: “output/trigger-00000.prepack_trigger/proteins_prepacked.pdb”,
“score.sf”: “output/trigger-00001.snug_dock_trigger/score.sf”,
“status”: 0
}
However, I do have a proteins.prepacked.pdb file in the outputtrigger-00000.prepack_trigger directory.
Can anyone help?
Thanks,
Adva
.
