Member Listing – Rosetta Commons

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Name	Organization	Research Summary
Cooper, Seth	Northeastern University	Foldit	View Map
Rocklin, Gabriel	Northwestern University	High-throughput protein design and biophysics	View Map
Labonte, Jason	Notre Dame of Maryland University	biomolecular modeling of carbohydrates and post-translational modifications	View Map
Lindert, Steffen	Ohio State University	structure determination from sparse experimental data	View Map
Koehler Leman, Julia	Open Molecular Software Foundation	I develop methods for membrane protein modeling, also with the use of NMR restraints.	View Map
Wang, Chu	Peking University	Chemoproteomic profiling and design of protein functions	View Map
Ramírez-Sarmiento, César	Pontifica Universidad Catolica de Chile	Evolution and design of metamorphic proteins, PET-degrading enzymes and photosynthetic blood substitutes	View Map
Bystroff, Christopher	Rensselaer Polytechnic Institute	Vaccine design, biosensor design	View Map
Nannemann, David	Rosetta Commons Foundation	Custom research using Rosetta methodologies.	View Map
Ambroggio, Xavier	Rosetta Design Group	Macromolecular modeling for the advancement and understanding of human health and disease.	View Map
Khare, Sagar	Rutgers University	We work on the design of novel enzymes and proteins for applications in therapeutics and biocatalysis	View Map
Yang, Jianyi	Shandong University	Protein and RNA structure prediction	View Map
Dou, Jiayi	ShanghaiTech University	Our lab develops de novo proteins as innovative tools for neuroscience, currently focusing on light-responsive proteins, ion channels, and membrane fusion systems to advance brain research.	View Map
Das, Rhiju	Stanford University	Modeling and design of complex structured RNA	View Map
Huang, Possu	Stanford University	Protein design method development as well as developing novel cancer immunotherapy	View Map
Schief, William	The Scripps Research Institute	HIV vaccine design; epitope-focused vaccine design; germline-targeting vaccine design.	View Map
Schiffner, Torben	The Scripps Research Institute	Vaccine Design	View Map
Kulp, Daniel	The Wistar Institute	The Kulp lab focuses on rational vaccine and therapeutic antibody design for a variety of NIAID priority infectious diseases (e.g. Lassa Virus) and cancer targets.	View Map
Thyme, Summer	University of Alabama at Birmingham	Testing computational predictions in zebrafish models of neurodevelopmental disorders, with a focus on drug discovery.	View Map
Höcker, Birte	University of Bayreuth	Computational and experimental protein design	View Map
Parmeggiani, Fabio	University of Bristol	Design of modular structures	View Map
DeGrado, Bill	University of California San Francisco	De novo protein design. Drug design. Membrane protein design.	View Map
Kortemme, Tanja	University of California San Francisco	I am interested in approaches to design and build new biological functions, and to probe and control protein functions in complex biological systems.	View Map
Siegel, Justin	University of California, Davis	Discovery and Design of Novel Enzymes	View Map
Yarov-Yarovoy, Vladimir	University of California, Davis	My research interests and expertise encompass neuroscience, protein structure, computational biology, and evolution. Main focus of my research group is on structure and function studies of voltage-gated ion channels, computational design and chemical synt	View Map
Gonen, Shane	University of California, Irvine	Structural Biology, CryoEM, Protein Design	View Map
Jiang, Lin	University of California, Los Angeles	computational structural biology and drug design for Alzheimer's, Parkinson's and other degenerative disorders	View Map
Haussler, David	University of California, Santa Cruz	Needs update	View Map
Yeh, Andy	University of California, Santa Cruz	de novo luciferase design	View Map
Whitehead, Tim	University of Colorado Boulder	We seek to understand and exploit molecular recognition in macromolecules	View Map
Shirts, Michael	University of Colorado Boulder	Thermodynamics and structure of nonbiological foldamers	View Map
Stein, Amelie	University of Copenhagen	consequences of mutations on protein structure & function	View Map
Horowitz, Scott	University of Denver	Nucleic Acids effect on Proteostasis and Foldit	View Map
Strauch, Eva-Maria	University of Georgia	Protein design of protein-protein interactions, vaccine development, antivirals, protein stabilization, gene delivery	View Map
Drew, Kevin	University of Illinois Chicago	Macromolecular Identification, Structure, & Function	View Map
Procko, Erik	University of Illinois Urbana-Champaign	Needs update	View Map
Slusky, Joanna	University of Kansas	Enzyme and outer membrane protein evolution and design	View Map
Johnson, David	University of Kansas	Computational chemical biology	View Map
Pierce, Brian	University of Maryland	Modeling and design of immune recognition	View Map
Khatib, Firas	University of Massachusetts Dartmouth	Our group is interested in combining the power of humans and computers to tackle other difficult scientific problems.	View Map
O'Meara, Matthew	University of Michigan	Computational Pharmacology	View Map
Sztain, Terra	University of Michigan	Computer-aided molecular design	View Map
Yesselman, Joe	University of Nebraska-Lincoln	RNA 3D structure thermodynamics and design.	View Map
Kuhlman, Brian	University of North Carolina at Chapel Hill	Computational Protein Design	View Map
Kratochvil, Huong	University of North Carolina at Chapel Hill	We design new membrane proteins for novel applications in environmental sustainability and functional proteins for next-generation therapeutics.	View Map
Hosseinzadeh, Parisa	University of Oregon	Protein/peptide design	View Map
Samanta, Rituparna	University of South Florida	Engineering proteins in different environments.	View Map
Cong, Qian	University of Texas Southwestern	We mine large-scale data for biological discoveries	View Map
Joachimiak, Lukasz	University of Texas Southwestern	Mechanisms of amyloid (mis)folding	View Map
Harrison, Joe	University of the Pacific	We model ubiquitin interactions and design protein based inhibitors of ubiquitin pathways	View Map

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