Member Listing – Rosetta Commons

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Name	Organization	Research Summary
Khare, Sagar	Rutgers University	We work on the design of novel enzymes and proteins for applications in therapeutics and biocatalysis	View Map
Mills, Jeremy	Arizona State University	We use Rosetta to design proteins in which non-canonical amino acids provide functions that would be difficult to achieve using naturally occurring amino acids alone.	View Map
Whitehead, Tim	University of Colorado Boulder	We seek to understand and exploit molecular recognition in macromolecules	View Map
Harrison, Joe	University of the Pacific	We model ubiquitin interactions and design protein based inhibitors of ubiquitin pathways	View Map
Cong, Qian	University of Texas Southwestern	We mine large-scale data for biological discoveries	View Map
Baker, David	University of Washington	We develop protein design software and use it to create molecules that solve modern challenges in medicine, technology and sustainability.	View Map
Barth, Patrick	Ecole Polytechnique Federale de Lausanne (EPFL)	we develop and apply computational/experimental approaches for designing proteins and cells with novel functionalities	View Map
Fischer, Eric	Dana-Farber Cancer Institute	We cultivate a multi-disciplinary and highly collaborative approach to science to tackle fundamental questions in biology and pharmacology.	View Map
Brown, Benjamin	Vanderbilt University	We combine precision medicine computational structural biology with computer-aided small molecule drug discovery.	View Map
Moody, James	Brigham Young University	We carry out computational engineering and experimental validation of enzymes and protein crystallization chaperones.	View Map
Glasgow, Anum	Columbia University	We aim to understand the molecular mechanisms underlying conformational changes in proteins, and we use what we learn to engineer new therapeutics.	View Map
Bystroff, Christopher	Rensselaer Polytechnic Institute	Vaccine design, biosensor design	View Map
Schiffner, Torben	The Scripps Research Institute	Vaccine Design	View Map
Raman, Vatsan	University of Wisconsin-Madison	Understanding protein sequence-function landscapes and designing novel proteins	View Map
Lu, Peilong	Westlake University	Transmembrane protein design	View Map
Shirts, Michael	University of Colorado Boulder	Thermodynamics and structure of nonbiological foldamers	View Map
Kulp, Daniel	The Wistar Institute	The Kulp lab focuses on rational vaccine and therapeutic antibody design for a variety of NIAID priority infectious diseases (e.g. Lassa Virus) and cancer targets.	View Map
Chen, Zibo	Westlake University	The Chen Lab combines mammalian synthetic biology with de novo protein design to write biological programs at the molecular, cellular, and tissue levels.	View Map
Thyme, Summer	University of Alabama at Birmingham	Testing computational predictions in zebrafish models of neurodevelopmental disorders, with a focus on drug discovery.	View Map
Malmström, Lars	University of Zurich	Studying protein-protein interactions on bacterial surfaces	View Map
Lindert, Steffen	Ohio State University	structure determination from sparse experimental data	View Map
Pallesen, Jesper	Indiana University	Structural immunology; structure-guided protein design	View Map
Gonen, Shane	University of California, Irvine	Structural Biology, CryoEM, Protein Design	View Map
Dunbrack, Roland	Fox Chase Cancer Center	Structural bioinformatics and structure prediction of proteins and protein complexes relevant to cancer biology and therapeutics	View Map
Yesselman, Joe	University of Nebraska-Lincoln	RNA 3D structure thermodynamics and design.	View Map
Azoitei, Mihai	Duke University	Research in our group is focused on two synergistic areas that are critical for the development of vaccines against highly infectious pathogens: 1) rational immunogen design; and 2) determining the immunogen properties that lead to B cell activation.	View Map
Hosseinzadeh, Parisa	University of Oregon	Protein/peptide design	View Map
DiMaio, Frank	University of Washington	Protein structure prediction	View Map
Wallner, Björn	Linköping University	Protein interactions, peptides, disorder, flexibility and machine learning	View Map
Bradley, Philip	Fred Hutchinson Cancer Research Center	Protein fold design and protein interaction specificity, especially in the immune system	View Map
Ovchinnikov, Sergey	Harvard University	Protein Evolution	View Map
Jha, Ramesh	Los Alamos National Laboratory	Protein engineering applied to synthetic biology	View Map
Boyden, Ed	Massachusetts Institute of Technology	Protein engineering	View Map
Gray, Jeffrey	Johns Hopkins University	Protein docking, antibody engineering, glycoproteins, membrane proteins, deep learning	View Map
Strauch, Eva-Maria	University of Georgia	Protein design of protein-protein interactions, vaccine development, antivirals, protein stabilization, gene delivery	View Map
Huang, Possu	Stanford University	Protein design method development as well as developing novel cancer immunotherapy	View Map
Schoeder, Clara	Leipzig University	Protein design for novel immunotherapeutic drugs, such as genetherapy vectors (AAV), cellular therapeutics (CAR T cell therapy), antibody design and vaccine design	View Map
Huber, Thomas	Australian National University	protein design for genetic code expansion, paramagnetic NMR	View Map
Koga, Nobuyasu	Institute for Molecular Science	Protein Design	View Map
Liu, Sen	Hubei University of Technology	Our main goal is combining computational and experimental methods to understand the structure, function, and regulation of proteins, aiming to develop drugs, molecular tools, and valuable products.	View Map
Khatib, Firas	University of Massachusetts Dartmouth	Our group is interested in combining the power of humans and computers to tackle other difficult scientific problems.	View Map
Horowitz, Scott	University of Denver	Nucleic Acids effect on Proteostasis and Foldit	View Map
Bonneau, Rich	New York University	Needs update	View Map
Charpentier, Emmanuelle	Max Planck Institute for Science of Pathogens	Needs update	View Map
Grigoryan, Gevorg	Dartmouth College	Needs update	View Map
Haussler, David	University of California, Santa Cruz	Needs update	View Map
Procko, Erik	University of Illinois Urbana-Champaign	Needs update	View Map
Strauss, Charlie	Los Alamos National Laboratory	Needs update	View Map
Yarov-Yarovoy, Vladimir	University of California, Davis	My research interests and expertise encompass neuroscience, protein structure, computational biology, and evolution. Main focus of my research group is on structure and function studies of voltage-gated ion channels, computational design and chemical synt	View Map
Yang, Zhongyue	Vanderbilt University	My research group focuses on integrating first-principles simulation and data-driven modeling to automatically evaluate, understand, and design functional biomolecules for catalytic and biomedical applications.	View Map

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