Member Listing – Rosetta Commons

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Name	Organization	Research Summary
Kortemme, Tanja	University of California San Francisco	I am interested in approaches to design and build new biological functions, and to probe and control protein functions in complex biological systems.	View Map
Koehler Leman, Julia	Open Molecular Software Foundation	I develop methods for membrane protein modeling, also with the use of NMR restraints.	View Map
Raveh, Barak	Hebrew University	Integrative spatiotemporal modeling of dynamic biological research	View Map
Madl, Tobias	Medical University of Graz	Integrative structural biology and metabolomics. Tobias Madl and his team investigate the molecular mechanisms of how disordered proteins regulate signal transduction, intracellular transport and phase separation.	View Map
Bjelic, Sinisa	Linnaeus University	Intersted in functionalizing proteins, understanding biology, and having fun!	View Map
Drew, Kevin	University of Illinois Chicago	Macromolecular Identification, Structure, & Function	View Map
Ambroggio, Xavier	Rosetta Design Group	Macromolecular modeling for the advancement and understanding of human health and disease.	View Map
Joachimiak, Lukasz	University of Texas Southwestern	Mechanisms of amyloid (mis)folding	View Map
Jefferson, Robert	King's College London	Modeling & design of dynamic membrane receptor complexes, Engineering membrane protein quaternary stability	View Map
Das, Rhiju	Stanford University	Modeling and design of complex structured RNA	View Map
Pierce, Brian	University of Maryland	Modeling and design of immune recognition	View Map
Ribeiro-Filho, Helder	CNPEM	Modeling and designing proteins for immune system modulation	View Map
Künze, Georg	Leipzig University	Molecular modeling and numerical simulations for the elucidation of membrane proteins, integration of NMR spectroscopy data and enzyme engineering	View Map
Ledwitch, Kaitlyn	Vanderbilt University	My core research develops biophysical and biomolecular NMR approaches to uncover the structural dynamics and functional mechanisms of membrane proteins.	View Map
Sgourakis, Nik	Children's Hospital of Philadelphia	My independent research program lies at the interface of biophysics and structural biology, where experimental and computational tools are developed and applied to tackle contemporary problems in molecular immunology.	View Map
Polizzi, Nicholas	Dana-Farber Cancer Institute	My lab aims to learn the rules of protein–ligand binding through the lens of de novo protein design.	View Map
Brunette, TJ	Align Bio	My research focuses on developing protein design methods for generating large datasets and designing experiments that utilize cloud-based labs.	View Map
Yang, Zhongyue	Vanderbilt University	My research group focuses on integrating first-principles simulation and data-driven modeling to automatically evaluate, understand, and design functional biomolecules for catalytic and biomedical applications.	View Map
Yarov-Yarovoy, Vladimir	University of California, Davis	My research interests and expertise encompass neuroscience, protein structure, computational biology, and evolution. Main focus of my research group is on structure and function studies of voltage-gated ion channels, computational design and chemical synt	View Map
Bonneau, Rich	New York University	Needs update	View Map
Charpentier, Emmanuelle	Max Planck Institute for Science of Pathogens	Needs update	View Map
Grigoryan, Gevorg	Dartmouth College	Needs update	View Map
Haussler, David	University of California, Santa Cruz	Needs update	View Map
Procko, Erik	University of Illinois Urbana-Champaign	Needs update	View Map
Strauss, Charlie	Los Alamos National Laboratory	Needs update	View Map
Horowitz, Scott	University of Denver	Nucleic Acids effect on Proteostasis and Foldit	View Map
Khatib, Firas	University of Massachusetts Dartmouth	Our group is interested in combining the power of humans and computers to tackle other difficult scientific problems.	View Map
Dou, Jiayi	ShanghaiTech University	Our lab develops de novo proteins as innovative tools for neuroscience, currently focusing on light-responsive proteins, ion channels, and membrane fusion systems to advance brain research.	View Map
Liu, Sen	Hubei University of Technology	Our main goal is combining computational and experimental methods to understand the structure, function, and regulation of proteins, aiming to develop drugs, molecular tools, and valuable products.	View Map
Wayment-Steele, Hannah	University of Wisconsin-Madison	Our research seeks a predictive understanding of biomolecular dynamics and mechanisms that underlie biological function and shape evolution.	View Map
Yang, Jianyi	Shandong University	Protein and RNA structure prediction	View Map
Koga, Nobuyasu	Institute for Molecular Science	Protein Design	View Map
Dürr, Simon	HES-SO Valais-Wallis	Protein Design and Molecular Modelling	View Map
Huber, Thomas	Australian National University	protein design for genetic code expansion, paramagnetic NMR	View Map
Schoeder, Clara	Leipzig University	Protein design for novel immunotherapeutic drugs, such as genetherapy vectors (AAV), cellular therapeutics (CAR T cell therapy), antibody design and vaccine design	View Map
Huang, Possu	Stanford University	Protein design method development as well as developing novel cancer immunotherapy	View Map
Strauch, Eva-Maria	University of Georgia	Protein design of protein-protein interactions, vaccine development, antivirals, protein stabilization, gene delivery	View Map
Gray, Jeffrey	Johns Hopkins University	Protein docking, antibody engineering, glycoproteins, membrane proteins, deep learning	View Map
Boyden, Ed	Massachusetts Institute of Technology	Protein engineering	View Map
Jha, Ramesh	Los Alamos National Laboratory	Protein engineering applied to synthetic biology	View Map
Ovchinnikov, Sergey	Harvard University	Protein Evolution	View Map
Bradley, Philip	Fred Hutchinson Cancer Research Center	Protein fold design and protein interaction specificity, especially in the immune system	View Map
Wallner, Björn	Linköping University	Protein interactions, peptides, disorder, flexibility and machine learning	View Map
DiMaio, Frank	University of Washington	Protein structure prediction	View Map
Hosseinzadeh, Parisa	University of Oregon	Protein/peptide design	View Map
Azoitei, Mihai	Duke University	Research in our group is focused on two synergistic areas that are critical for the development of vaccines against highly infectious pathogens: 1) rational immunogen design; and 2) determining the immunogen properties that lead to B cell activation.	View Map
Yesselman, Joe	University of Nebraska-Lincoln	RNA 3D structure thermodynamics and design.	View Map
Dunbrack, Roland	Fox Chase Cancer Center	Structural bioinformatics and structure prediction of proteins and protein complexes relevant to cancer biology and therapeutics	View Map
Gonen, Shane	University of California, Irvine	Structural Biology, CryoEM, Protein Design	View Map
Pallesen, Jesper	Indiana University	Structural immunology; structure-guided protein design	View Map

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