Member Listing – Rosetta Commons

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Name	Organization	Research Summary
Yesselman, Joe	University of Nebraska-Lincoln	RNA 3D structure thermodynamics and design.	View Map
Yarov-Yarovoy, Vladimir	University of California, Davis	My research interests and expertise encompass neuroscience, protein structure, computational biology, and evolution. Main focus of my research group is on structure and function studies of voltage-gated ion channels, computational design and chemical synt	View Map
Yang, Zhongyue	Vanderbilt University	My research group focuses on integrating first-principles simulation and data-driven modeling to automatically evaluate, understand, and design functional biomolecules for catalytic and biomedical applications.	View Map
Xu, Chunfu	National Institute of Biological Sciences	Computational design of functional proteins	View Map
Whitehead, Tim	University of Colorado Boulder	We seek to understand and exploit molecular recognition in macromolecules	View Map
Wang, Chu	Peking University	Chemoproteomic profiling and design of protein functions	View Map
Wallner, Björn	Linköping University	Protein interactions, peptides, disorder, flexibility and machine learning	View Map
Vorobieva, Anastassia	VIB (Belgium)	De novo design of membrane proteins and nanopores	View Map
Thyme, Summer	University of Alabama at Birmingham	Testing computational predictions in zebrafish models of neurodevelopmental disorders, with a focus on drug discovery.	View Map
Strauss, Charlie	Los Alamos National Laboratory	Needs update	View Map
Strauch, Eva-Maria	University of Georgia	Protein design of protein-protein interactions, vaccine development, antivirals, protein stabilization, gene delivery	View Map
Stein, Amelie	University of Copenhagen	consequences of mutations on protein structure & function	View Map
Smith, Colin	Wesleyan University	Dynamics of computationally designed and naturally occurring proteins	View Map
Slusky, Joanna	University of Kansas	Enzyme and outer membrane protein evolution and design	View Map
Siegel, Justin	University of California, Davis	Discovery and Design of Novel Enzymes	View Map
Shirts, Michael	University of Colorado Boulder	Thermodynamics and structure of nonbiological foldamers	View Map
Sgourakis, Nik	Children's Hospital of Philadelphia	My independent research program lies at the interface of biophysics and structural biology, where experimental and computational tools are developed and applied to tackle contemporary problems in molecular immunology.	View Map
Schoeder, Clara	Leipzig University	Protein design for novel immunotherapeutic drugs, such as genetherapy vectors (AAV), cellular therapeutics (CAR T cell therapy), antibody design and vaccine design	View Map
Schiffner, Torben	The Scripps Research Institute	Vaccine Design	View Map
Schief, William	The Scripps Research Institute	HIV vaccine design; epitope-focused vaccine design; germline-targeting vaccine design.	View Map
Rocklin, Gabriel	Northwestern University	High-throughput protein design and biophysics	View Map
Raveh, Barak	Hebrew University	Integrative spatiotemporal modeling of dynamic biological research	View Map
Ramírez-Sarmiento, César	Pontifica Universidad Catolica de Chile	Evolution and design of metamorphic proteins, PET-degrading enzymes and photosynthetic blood substitutes	View Map
Raman, Vatsan	University of Wisconsin-Madison	Understanding protein sequence-function landscapes and designing novel proteins	View Map
Procko, Erik	University of Illinois Urbana-Champaign	Needs update	View Map
Polizzi, Nicholas	Dana-Farber Cancer Institute	My lab aims to learn the rules of protein–ligand binding through the lens of de novo protein design.	View Map
Pierce, Brian	University of Maryland	Modeling and design of immune recognition	View Map
Parmeggiani, Fabio	University of Bristol	Design of modular structures	View Map
Pallesen, Jesper	Indiana University	Structural immunology; structure-guided protein design	View Map
Ovchinnikov, Sergey	Harvard University	Protein Evolution	View Map
Oh, Byung-Ha	Korea Advanced Institute of Science and Technology	Computational design of proteins for biomedical application	View Map
Oberdorfer, Gustav	Graz University of Technology	Computational design of functional proteins	View Map
O'Meara, Matthew	University of Michigan	Computational Pharmacology	View Map
Noy, Dror	MIGAL Galilee Research Institute	Computational design of photosynthetic protein analogues	View Map
Norn, Christoffer	BioInnovation Institute	Computational design of integral membrane protein modulators	View Map
Moody, James	Brigham Young University	We carry out computational engineering and experimental validation of enzymes and protein crystallization chaperones.	View Map
Mills, Jeremy	Arizona State University	We use Rosetta to design proteins in which non-canonical amino acids provide functions that would be difficult to achieve using naturally occurring amino acids alone.	View Map
Meiler, Jens	Vanderbilt University	computational structural biology	View Map
Malmström, Lars	University of Zurich	Studying protein-protein interactions on bacterial surfaces	View Map
Madl, Tobias	Medical University of Graz	Integrative structural biology and metabolomics. Tobias Madl and his team investigate the molecular mechanisms of how disordered proteins regulate signal transduction, intracellular transport and phase separation.	View Map
Lu, Peilong	Westlake University	Transmembrane protein design	View Map
London, Nir	Weizmann Institute of Science	Covalent small molecule ligand discovery and design	View Map
Ljubetič, Ajasja	National Institute of Chemistry (Slovenia)	De novo designed dynamic proteins	View Map
Liu, Sen	Hubei University of Technology	Our main goal is combining computational and experimental methods to understand the structure, function, and regulation of proteins, aiming to develop drugs, molecular tools, and valuable products.	View Map
Lindert, Steffen	Ohio State University	structure determination from sparse experimental data	View Map
Labonte, Jason	Notre Dame of Maryland University	biomolecular modeling of carbohydrates and post-translational modifications	View Map
Kuroda, Daisuke	National Institute of Infectious Diseases (Japan)	Computer-aided design of antibodies and vaccine immunogens	View Map
Künze, Georg	Leipzig University	Molecular modeling and numerical simulations for the elucidation of membrane proteins, integration of NMR spectroscopy data and enzyme engineering	View Map
Kulp, Daniel	The Wistar Institute	The Kulp lab focuses on rational vaccine and therapeutic antibody design for a variety of NIAID priority infectious diseases (e.g. Lassa Virus) and cancer targets.	View Map
Kuhlman, Brian	University of North Carolina at Chapel Hill	Computational Protein Design	View Map

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