Member Site › Forums › PyRosetta › PyRosetta – General › loop modeling error ‘CcdLoopClosureMover’ object is not callable
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Anonymous.
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October 22, 2013 at 8:49 am #1735
Anonymous
I am using the current release “PyRosetta v2.012” it stucked, error is given bellow
the “loops.py” script which i m using have been attached with this post this script is provided online its not my own script: thanksfrom where i can get the reference for all the available methods and function of Pyrosetta so that i can use that as per my requirement and it seems that scripts are written for different versions may not work for all the versions so how can i get the version specific details of various pyrosetta functions
Error Log++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++Error Log
core.chemical.ResidueTypeSet: Finished initializing centroid residue type set.
Created 1980 residue types
set up job distributor
randomizing loop
low res loop modeling
Traceback (most recent call last):
File “loops.py”, line 89, in
ccd(p)
TypeError: ‘CcdLoopClosureMover’ object is not callable
C:UsersZebrafishDesktopLOOPmodeingloop_modelingloop_modeling>python loops. -
October 22, 2013 at 9:27 pm #9441
Anonymous
http://www.pyrosetta.org/tutorials
This is just general, most commands should work with your 2.012 version.
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October 23, 2013 at 6:39 am #9442
Anonymous
Hi thanks for your reply.
i m very new user of rosetta and pyrosetta i have idea about the algorithms of various molecular simulation programs like Gromacs autodock and other.i want to know is there any documentation available about all the algorithms and methods used in Rosetta ? more precisely rather then hard core scientific notation i am looking for an easy and more descriptive documentation which can provide the information of various methods available in Rosetta.
Actually i found one very impressive feature of Rosetta and PyRosetta, with the help of various methods i can write my own algorithm to solve a biological problem but it should required a detailed knowledge of various libraries, objects and methods.
thanks
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