This section used to have tips for reading protein/RNA poses into Rosetta, but is now deprecated

  • The standard ResidueTypeSet of Rosetta can handle RNA, DNA, and proteins.
  • RNA is read in from PDB lines with 'A','C','G','U' residue names. DNA is read in from PDB lines with 'DA','DC','DG','DT'
  • There is a very active effort to now unify the scorefunctions for modeling RNA and proteins to enable structure prediction and design of RNP complexes and machines.

-- Updated R. Das, 2015.

See Also