Reply To: how do I repeat relax runs and get scoring functions at every state

[Anonymous]

*.sc file that I got only gives final scores. How do I get scores after every minimization step?

Thanks,
Temsiri

> I have two questions:
> 1) To compare two different minimization algorithms, I run “-relax -cenrlx -ex1 -ex2”, which, I believe, contains randomness in perturbation. How do I make each relax run the same?

You can add the flag -constant_seed

> 2) How do I get the output of scoring functions of the chain after every move, especially during minimization?

the *.sc file should record the scores

>
> Thank you very much.
> Temsiri